Walter J. Freeman Journal Article
e–Reprint
Methods of Analysis of Brain
Electrical & Magnetic Signals:
Analytic Techniques Used in the Search for the
Physiological Basis of the EEG
WALTER J. FREEMAN
Department of Molecular & Cell
Biology, University of California, Berkeley, CA 94720, USA
Reprinted
from Chapt 18 of EEG Handbook (revised series, Vol. 1), A.S. Gevins and A.
Rémond (Eds.) 9 1987 Elsevier Science Publishers B.V. (Biomedical
Division)
In the course of
generating behavior, the brain also generates time-varying electric and
magnetic fields. The aim of electroencephalography is to record and measure
samples of these fields during certain states and sequences of behavior, in
order to explain some of the mechanisms by which behavior is generated.
In this chapter the
brain is treated as a hierarchically organized network of neurons whose
dynamics determine behavior and vice versa. The dynamics is largely determined
by the strengths of interaction among the neurons. The tasks of physiologists
are:
(a) to measure
accurately the time courses and spatial patterns of potential fields,
(b) to simulate the
wave shapes of these events with the solutions to differential equations or
their equivalent that represent the dynamics of neural networks,
(c) to estimate
strengths of action ('gains') from rates of change of potential, and
(d) to interpret
changes in strengths of neural action in relation to changes in behavioral
states.
Procedures are outlined
for acquiring and measuring suitable data bases, and for constructing and
evaluating explanatory equations. Although the brain is a distributed and
highly non-linear system, the treatment begins with the development of lumped,
linear systems. This is because the construction of a neural dynamic model
requires specification of the network of elements and their connections,
definition of state variables and observables, types and locations of
non-linear operators, measurement of open loop time and space constants, and
evaluation of state-dependent coefficients. Analysis of non-linear properties
presupposes an understanding in detail of these and other features of a system.
Fortunately, linear domains of complex systems are ubiquitous in the brain when
they are sought; they are the best preparatory path of access to the
distributed, non-linear, multiply looped feedback systems that generate
behavior and the EEG. Emphasis is given to techniques for fine-grain spatial
analysis of the EEG, for use of behavioral correlation to validate and optimize
procedures of measurement, and for empirical detection of chaos, limit cycles,
and random components of EEG recordings. Examples are drawn from the mammalian
olfactory bulb, in which the neural non-linear dynamics manifested in the EEG
sustain the basic operations in olfactory perception.
18.1. The need for models
The neuron releases
electromotive forces (EMFs) at synapses and trigger zones that drive electric
current along dendrites and axons, so that activity is transmitted from one
part of the neuron to another. The current must flow in a closed path; it
crosses the membrane in one direction at the site of its EMF, crosses in the
other direction elsewhere including its sites of action, and passes through the
extraneuronal tissue space in its return path. As the current flows across the
resistance of the tissue, it causes a low amplitude field of potential. That
field constitutes a sign of the activity, but this sign is not itself the
activity. The activity is the space-time pattern of depolarization and
hyperpolarization of the neuron that is established by the flow of current
across the membrane resistance, it is not the potential difference established
by the flow across the extraneuronal tissue resistance. The manifestation is
like the sound of a single part of an engine; it mixes with the sounds of all
other parts to create a roar. Our task of analysis is to localize and measure
the pings and rumbles of particular parts, so as to infer what the parts
contribute to the function of the whole engine. While it is conceivable that
extracellular EEG currents might contribute directly to brain function, just as
sound vibrations might partly determine the performance of an engine, that
possibility is disallowed here.
The key to
understanding brain function lies in determining the strength of action
(represented by a coefficient called the 'gain') of one group of neurons on
another, and the changes in gain with altered behavior. When we can isolate two
groups and show that the action is unidirectional, then the problem is mainly
to demonstrate for each group the relation between its activity and its
manifestation of activity (its sign to the observer, not to the other group).
The gain is given by the ratio of the amplitudes of the two activities.
Groups in the intact
brain are not isolated. They function in networks with parallel forward and
feedback loops. The problem of determining activities from the signs of
activities is the same as in the isolated case, but the procedures for
estimating the forward and feedback gains are more complex than taking ratios
of amplitudes.
The basic procedures
in dynamics are to measure the rates of change and the frequencies in signals,
and to construct a model so as to infer strengths of action as gains from the
measurements. The model typically is a differential equation that allows us to
infer strengths of synaptic interaction among groups of neurons from recordings
of evoked potentials and the EEG.
As an assembly of
neurons the brain is structured by their interconnections into a hierarchy of
parts. Locally dense interconnections, synaptic and non-synaptic, form local
modules such as columns in cortex and clusters in nuclei of the basal ganglia.
Axonal tracts, usually in bidirectional pairs, serve to interconnect these
local parts into subsystems comprising areas of cortex and their related parts
of the basal ganglia. The subsystems are integrated to form major entities such
as the motor, visual and limbic systems; the interactive total comprises the
functioning brain.
In this review the
description of these parts for computational purposes is by a hierarchy of sets
(Freeman 1975, pp. 25-34). A KO set represents a spatially distributed
collection (KO mass) of neurons having a common input (e.g., a set of sensory
receptors, or the first order neurons to which they project) and a common sign
of output (excitatory, +, or inhibitory, -) but no interaction between them. A
KI set models a collection (KI mass) of neurons that has the first two
properties but that is densely interactive by interconnections, either mutually
excitatory (KIe) or mutually inhibitory (KIi). A KII set describes the
interaction of a collection (KII mass) of neurons consisting of a Kle mass and a KII mass. KI and KII sets
represent the neuronal assemblies commonly comprised by areas of cortex of
nuclei; KI and KII subsets suffice for local collections such as cortical
columns and nuclear modules. A network comprising a subsystem is modeled by the
conjoining of KI and KII sets into a KIII set. A network of KIII sets may serve
to represent a neural system at the KIV level, although this step remains to be
demonstrated.
The dynamic action of neurons in the
brain is regulated by the input from sensory receptors (interoceptor and
exteroceptor) and by the strengths of the interconnections determined by genes,
by past experience incorporated by learning, and by the chemical environment in
the brain. The play of the active states is observed in goal-oriented behavior
and in the extraneuronal electric and magnetic fields generated by the neurons.
The aim of electroencephalography is to describe regular relationships between
these two observables, such that underlying neural active states can be
discerned and the dynamics of the generators can be understood.
To achieve this aim 3
levels of inference using models are required. First, a volume conductor model
is used to establish relations between neural active states and the fields of
potential that signify them. Given an electric or magnetic event and a
behavioral event, the neurons generating the electric currents must be
identified. Generally the neural elements for behavioral correlation are KO and
KI masses rather than single neurons. Estimates of their activity are derived
by appropriate ensemble averaging over the activities of neurons comprising
them. By use of neuroanatomy, neurophysiology, neuropharmacology, and volume
conductor theory an electrostatic or electric current model is devised for each
postulated generator of a component in the event, and the spatial distribution
of that component is tested for compatibility with the prediction of the model.
Upon completion of the analysis we should be able to infer that a pattern of
potential difference of a certain kind over points near or in the brain
manifests excitation or inhibition of a certain KO or KI mass or a portion
thereof.
Second, a model is
required to relate given neural active states to neural operations. When a
neural mass is given a certain space-time pattern of input, it generates
another pattern of output. In effect it operates on the input to change it, add
to it, replace it or delete it. The nature of the operation is inferred by
comparing the input and output active states. The preferred language of
description is by an integrodifferential equation, in which an operation is
defined by the ratio of output to input. By constructing and solving a set of
equations for K sets representing the dynamics of a neural mass, and by further
transforming the solution in accordance with the volume conductor model, we can
expect to derive curves that can be closely fitted to observed neuropotential
patterns.
Third, a model is
required to relate neural operations to behavioral operations. This is the turn
of a coin by which a neural event is identified with a psychological event.
This, the most difficult of the 3 steps, is embodied in the experimental
paradigm in which the electric fields are measured. Unless behavior is properly
structured and controlled, the most precise measurements of potential are
likely to be meaningless.
This chapter is mainly
about the second stage, in which data are collected with properly positioned
electrodes in an appropriate behavioral context, and in which the task, is to
construct a set of differential or difference equations to describe the
space-time dynamics of neural systems. The choice of equations is a matter of
convenience, but the physiologist must choose on the basis of prior knowledge
of the cellular anatomy and physiology of the system of interest, including
data from unit and evoked potential studies that are independent of EEG
recordings. In order to lay out the underlying principles of analysis, this
discussion begins with lumped systems and ordinary differential equations. The
extension to distributed non-linear systems is straightforward for those who
have or will acquire the necessary mathematical tools. For the same reason the
examples begin with ERPs and poststimulus time histograms (PSTHs) from
electrical stimulation of brain pathways; the approach is the same for
treatment of events related to sensory stimulation and the EEG.
Readers who are
interested in mathematical and systems analysis of large scale neural activity
and the EEG will find related and alternative approaches in the references at
the end of this chapter. Particularly noteworthy are books by Griffith (1971),
Simon (1972), Lin and Segal (1974), Basar (1976), MacGregor and Lewis (1977),
Thatcher and John (1977), Childers (1978), and Nuñez (1981), and reports
by Wilson and Cowan (1972, 1973), Lopes da Silva et al. (1976), and Ingber
(1982).
18.2. Establishing the data base
The study of neural
dynamics is based on input-output pairs: a stimulus is measured and given, a
response is recorded and digitized, and the numbers representing input, output
and context are stored. The procedure is repeated 102-105 times until there are no further surprises. The pairs are
grouped in accordance with input and context parameters; they might also be
grouped tentatively in relation to output, if there are salient features such
as the apparent presence or absence of major components or distinctive wave
shapes with no apparent intermediates to suggest gradation.
Four aspects of the
nervous system must be kept constantly in mind during these explorations:
background activity (often mislabeled 'noise'), instability, time variance, and
non-linearity. First, all normal nervous systems are continually active whether
or not stimuli are given. The data base should include a null class with no
known stimuli as a basis for characterizing intrinsic activity. The use of
randomized stimuli with respect to time windows of observation is
unsatisfactory, because the distributions of amplitudes may be warped by evoked
potentials. These records should be processed in the same way as all others,
including ensemble averaging, spectral analysis, amplitude histograms,
calculation of moments, covariance matrices, etc.
Second, in collecting
pairs the assumptions are made that the neural system is in a certain state
prior to stimulation, that it is perturbed by the stimulus away from that
state, and that it returns to the same state. More specifically it is essential
to include in each output member a segment of prestimulus baseline, in order to
verify that the presumed state does hold, and that the preceding response has
terminated. More generally we should remain aware that the stimulus may elicit
an instability, such that the neural system may change from a basal state to
another state and perhaps back again some time later. Some well-known examples
include seizures, spreading depression, kindling, long-term potentiation, and
learning, but subtler shifts may hold the key to analysis. The point is
important because the solutions to the neural dynamics in each state can be described
by a set of time-dependent equations, and a new set may be required for each
new state. This is most likely to be the case if each state is described by a
linear approximation.
Third, it is a truism
that the nervous system is never twice the same, and that even in a certain
state, defined by both behavioral and neural variables, there is time variance
such as by fluctuation, drift or learning. These variations are entered into a
set of differential equations by use of coefficients that vary randomly or with
time or with contextual parameters such as satiety or adaptation, on the
assumption that the time scale of this kind of variance is very long or very
short in comparison to the duration of an output event. The coefficients are
fixed for the duration of the simulation of each event, and they are changed to
new values with each simulation, if necessary.
Fourth, linearity
denotes the property of a limited domain of dynamics in which superposition
holds. In this kind of state outputs from multiple inputs are additive, and
their magnitudes are proportional to the input magnitudes. Experimentally this
domain is demonstrated by paired-shock testing, in which two stimuli are given
first separately and then together. The algebraic sum of the separate digitized
responses equals the compound digitized response if the neural system is
perturbed within one of its linear domains. If the sum of single responses
differs from the compound response, the system is in a non-linear domain.
Neurons and neural
systems have multiple linear and non-linear domains. The demarcation requires
extensive parametric testing using systematic variation of stimulus intensity,
duration, rate and interval. A non-linear domain may be linearized by
re-definition of variables, or it may be divided into smaller domains that are
described by piece-wise linear approximations. For example, the action
potential manifests a non-linear dynamic process, but trains of action
potentials can be described by pulse frequency or density, which in itself may
be a linear variable with respect to transmembrane potential.
However tedious
parametric analysis might be, it is essential as the basis for constructing a
first dynamic model of a neural system. We will do well to recall that 20 years
of subthreshold testing of axons in their linear domain was a necessary basis
for the construction of the explicitly non-linear Hodgkin-Huxley equations for
the nerve action potential. The dynamics of a system in one of its linear
domains is described by a set of linear differential equations. Once we
establish linear domains we can gently push the system outside and begin to ask
questions of the location and nature of non-linearities, whether static (as in
much evoked potential research) or dynamic (as with the action potential), and
of the nature of the thresholds and stability properties that characterize one
or more non-linear domains. Indeed, it is in these non-linear domains where
answers to questions on the neural bases of behavior are to be found. The
doorway to access is provided by the linear differential equation or its
equivalent.
18.3. The use of basis functions
The search for linear
domains requires use of low intensity stimuli in order to keep the neural
system in a low amplitude range. This does not guarantee linearity, but
conversely it is nearly certain that if the evoked potential amplitude exceeds
2 or 3 standard deviations of background activity, the neural mechanism will be
driven into a non-linear domain. Owing to the background activity, the low-amplitude
evoked potential can be observed and measured only with the aid of averaging
over ensembles to give an event related potential (ERP). The variability about
the average decreases with the square root of the number of events in the
average (see Ch. 5). However, to the extent that the evoked potential varies
over the time required to collect the ensemble, the information in the ERP
undergoes destructive averaging; the true shape may be lost, together with
information about the manner of variation.
Description of the
particular wave shapes of ERPs is often considered of secondary importance, the
principal aim being to determine the variation of shape within and between sets
of ERPs in relation to associated patterns of behavior. However, the
quantitative description of that variability by use of the variance in sets of
numbers requires that the shapes be clearly characterized and precisely
measured. Further, the information cannot be used to construct explanations of
neural dynamics until the wave shapes are fitted with curves.
Most ERPs have
irregular shapes that are difficult to describe and comprehend, and their
shapes vary erratically and often hugely from trial to trial. The two main
sources of the variation are the background EEG activity and the changes from
trial to trial in the neural mechanisms generating the ERPs. When the
experimental conditions relating to behavioral stimulus and response are fixed
to the extent possible, the variation in wave-form is reflected in the numbers
by what we will call 'uncorrelated variance.' When an experimental condition is
deliberately changed across trials, the ERPs can be expected to change as the
neural mechanisms change, and this introduces 'correlated variance.' A good
system of measurement should produce matrices of numbers that preserve the
correlated variance and minimize the uncorrelated variance. The aim is not to
suppress the variance but to partition it most effectively.
The primary step in
measuring the form and variance of an ERP is to decompose it into components.
Each has 3 aspects. First, each component is an elementary curve. These
elementary curves are called 'basis functions.' When a selected set of such
curves is added together, the sum should closely conform to the shape of the
ERP. Second, each component has a set of numbers or coefficients that denote
its height, width, rate of change, and other features. Third, each component
defines one or more coordinates, and the set of numbers denotes distances along
the axes. The number of coefficients in the set of basis functions specifies
the dimensions of the measurement space. In this point of view the measurement
of each ERP gives a vector in that space.
The basis functions
must be chosen so that each one represents unique aspects of the ERP. This
implies that the basis functions are independent of each other, and the
coordinate axis of each of the coefficients is not parallel to any other axis,
although it need not be orthogonal to any other. If they are not orthogonal,
then pairs of coefficients have non-zero correlation across sets of ERPs. For
example, the phase and frequency of a damped cosine function fitted to ERPs
will vary inversely, if the frequency varies from one ERP to the next, but the
duration of the first peak of the ERP will be fixed. In general, the shapes of
ERPs tend to vary in certain ways and not others owing to constraints in the
underlying neural mechanisms. These constraints become evident on correlation
and factor analysis of sets of coefficients (Freeman 1975, pp. 408-414). They
are exceedingly valuable in model-building.
Each behavioral
measure is also represented by an axis. The variation in wave-forms of the ERPs
and in behavior is represented by the variance of the numbers on each axis. If
there is covariance between the ERPs and behavior, the axes of the ERP
measurement space should be positioned (by the proper choice of the basis
functions and by varimax rotation in factor analysis - see Ch. 5 and 16) to
project strongly onto the behavioral axes in order to display that covariance.
From an alternative
perspective the ERP is conceived as a signal embedded in noise. Here the term
'noise' includes background EEG activity that is uncorrelated with the imposed
stimulus train as well as artifacts and electrode thermal noise. The signal is
asserted to have certain measurable attributes such as amplitude, latency,
frequency, etc. and the aim is to measure these in the presence of noise. With
the use of a digital computer we build a template or filter that is expected to
match the signal in order to identify it in the noise. The form of the signal
is expected to vary with changes in the behavioral conditions. That is, the
filter must be adaptive to the varying form of the signal. Furthermore, the
adaptive filter consists of the sum of a set of elementary curves (basis
functions) that is fitted to the ERP. Hence in both views the measurement
process consists in curve-fitting, and the requisite step is to choose the
basis functions, which may represent the parts of the ERP.
18.4. Decomposition of ERPs with analytic basis functions from the AERP
An ERP is commonly
interpreted as consisting of a sequence of peaks labeled N1, P1, N2, etc., each
of which is measured by height and latency. This basis function is an empirical
upright or inverted 'U.' Although useful in preliminary work this approach has
several drawbacks. Much of the information in the ERP is lost to the extent
that the amplitude and latency numbers extracted fail to allow reconstruction
of the ERP. The numbers give an inadequate basis on which to evaluate the rates
of change in the ERP, which are more valuable than the amplitudes of the peaks.
This is because interactive brain systems are more likely to reveal changes in
their sensitivities by changes in the rates and durations of their activity
patterns than by fluctuations in the amplitudes of activity. Uncertainties
arise when adjacent peaks merge or overlap. There is no way to partition the
uncorrelated variance from the variance that is related to stimulus and response
variables.
The deficiencies of
this approach can be remedied by using sets of elementary curves that are
called 'analytic basis functions.' Each is a continuous curve that extends over
the entire duration of each ERP and is defined by an algebraic term or
expression containing one or more coefficients.
The procedure for
using them has two stages. In the first stage an ensemble average ERP (AERP) is
made over a delimited set of ERPs. The individual ERP contains both signal and
noise; grand averaging minimizes the noise, although it does not entirely
eliminate it. Then a curve consisting of the sum of a set of analytic basis
functions is fitted to the AERP by adjusting the values of all the
coefficients. This curve is called a 'matched filter.' The fitted curve is
treated as an approximation for the signal, and the difference between the AERP
and the curve is treated as residual noise.
We assume that the
noise differs on successive trials, and that the shape of the signal also
differs due to the correlated variance. The shape of the average for the signal
must be unlike any of the signals; it is only an estimate for the shape of each
one. For example, if we take the ensemble average of a set of exponential
curves with a rate coefficient that varies randomly on successive trials, the
mean curve is not exponential but can be fitted with one to an approximation.
In addition to the distortion of the signal, the AERP of course contains none
of the variance of the ERPs.
In the second stage
the matched filter is used to measure the signal embedded in noise in each of
the ERPs. A curve from the same equation is fitted to each of the ERPs in the
set by readjusting the coefficients. That is, the filter is adapted to each
ERP. The variance in the set of ERPs is incorporated into a matrix of
coefficients (usually 4-10) of the basis functions, and the distortions from
the exponential form introduced into the AERP may be largely corrected.
The standard deviation
(S.D.) of the AERP may serve to evaluate the proportions of correlated and
uncorrelated variance in a preliminary assay. If the variance is determined by
the noise and not by changes in the shape of the ERPs, then the S.D. is
relatively constant over the time of the ensemble average. If there are changes
in the ERPs, then the S.D. is not uniform. An example is shown in Fig. 1 of the
AERP over ERPs from 20 trials at each of 3 stages in the training of a cat to
respond to an electrical shock to the lateral olfactory tract (LOT) as a
conditioned stimulus, while the evoked potential is recorded from the olfactory
cortex. Early in training with no significant behavioral responses the S.D. is
uniform. During acquisition the wave shape changes, and the S.D. increases. In
the later stage of consolidation the wave shape reverts near to its original
form, but the S.D. remains high in the neighborhood of the high amplitude of
the AERP, reflecting the variation in shape of the component ERPs. Higher
moments (the cubic and quartic) serve mainly to detect outliers and artifacts,
which can be deleted to improve the quality of the AERP.

Fig. 1. The relations are shown between the standard deviation (solid curves) and mean (dotted curves) of the AERPs of 3 sets of 9 event related potentials (ERPs) from implanted electrodes in a cat being trained to press a bar to the electrical stimulus (olfactory tract) used to evoke the potentials (prepyriform cortex). Above: response on <10% of trials; middle: >50% below: >90% (Freeman 1975).
This procedure
overcomes the deficiencies in raw digitized data. The number of axes in the
measurement space is reduced by an order of magnitude. Each coefficient is
evaluated on the basis of what is happening over the entire duration of an ERP,
so that information on both amplitudes and their rates of change is preserved.
Most importantly, curve-fitting introduces a structured hypothesis into the
measurement process. It asserts on the basis of the grand average that
particular parts or components such as exponentials or damped sine waves may be
used to describe the ERPs. When bursts of background EEG waves are superimposed
on the potential related to a behavioral event, and the signal in the ERP is
obscured by noise, the basis functions impose a form that is adaptive but
cannot be twisted arbitrarily.
More explicitly, if a neural mechanism
has certain stable properties, such that the generic character of its neural
dynamics manifested in a set of ERPs is invariant, then those ERPs from single
trials can be approximated by a set of curves all from the same equation over
sets of trials. The shape of ERPs varies from condition to condition due to
variations in the mechanism, and these variations are expressed in a matrix of
the coefficients in the equations of the fitted curves. Also each ERP contains
noise contributed by the background EEG. The noise can be expected to distort
the values of the coefficients from their putative true values (in the absence
of noise) on each trial.
However, a difference
will persist between the fitted curve and the ERP. The residuals may be
rejected after inspection, because the set of basis functions is not
established in respect to individual ERPs but to the AERP. This rejection is
the main basis for partitioning the variance, with retention only of that part
that is related to the coordinate space for measurement, i.e., the set of basis
functions, because the AERP serves to impose a structured hypothesis onto the
data. The matrix of coefficients will contain less information than the
digitized raw data, but that content should be more richly related to the
neural events underlying the ERPs and therefore to behavior. However, this
hypothesis should not go untested; we should always inspect the residuals and
test them for correlation with behavior before discarding them.
These procedures are
applied to the EEG in Section 18.10, where an ensemble average of a spatially
distributed set of EEG segments simultaneously recorded from an electrode array
(an AEEG) plays the role assigned here to the AERP.
18.5. Spectral analysis of ERPs
At this stage we may
use the Fourier transform and spectral analysis to decompose the wave shape of
the ERPs into sets of sines and cosines over a range of frequencies (see Ch.
4). There are several reasons for this. First, the ERPs may contain oscillatory
components that will require use of oscillatory basis functions. Second, the
results may suggest improvements in recording procedures to enhance or diminish
one or more parts of the spectrum by pre-filtering the ERPs; or, if the main
frequencies are separated by at least a factor of two, the ERPs may be
decomposed into two or more parts by pre-filtering. Third, spectral analysis
may be applied to the background EEG, which is a prime source of the variance of
the ERP. If there is a strong periodicity in the EEG, the stimulus repetition
rate should be set at an odd multiple of the half-length of the period. For
example, if a set of cortical evoked potentials is recorded in the presence of
strong gamma activity at 40 Hz, the stimulus rate should not be 5/sec (which
might lock on to a burst of gamma at any phase) but might be 4.5 or 5.5/sec; or
the interstimulus interval might be randomized.

Fig. 2. The characteristic effect on ERPs of increasing the stimulus intensity is a spectral shift to the left. The lowest curve is the amplitude spectrum of the prepyriform EEG in a cat. The remaining curves in ascending order are the amplitude spectra of the Fourier transforms of ERPs (normalized to equal maximal amplitude) over a range of increasing stimulus intensity. The asterisk shows the level of the threshold for behavioral responses to the electrical stimulation, at which the single evoked potentials are close in amplitude to the background EEG. At this level the ERP spectrum most closely conforms to the EEG spectrum. (From Freeman 1975.)
Yet another use of the
EEG spectrum is to compare it with the spectrum of the ERP (Fig. 2). Do the
spectral peaks occur at the same frequencies in the EEG and the ERP, and is it
desirable or not that they do so? From the standpoint of observability of the
single ERP it is not desirable, because the EEG and ERP cannot be separated by
bandpass filters. Moreover, such correspondence of spectral peaks happens most
often when the amplitude of the single-trial ERP is the same or less than the
amplitude of the EEG. Because the only distinguishing characteristic of the ERP
is the time of its occurrence, averaging in this case is a necessity.
From an alternative
standpoint, the stimulus is seen as superimposed on background input to a
functional group of neurons, and the characteristics of the response to the
stimulus should closely resemble those of the response to the background input.
With a strong stimulus the neural system may respond abnormally, usually
involving saturation or partial blockage of the neural mechanism, so that the
normal range of ERP variance is diminished. Then strong stimulation, which is
commonly used to improve signal to, noise ratios, should be avoided. After all,
the aim of analysis is not the suppression of variance but decomposition and
selective removal. Parametric testing should be used, in which the stimulus
intensity or some other experimental variable is changed in small steps over a
suitable range. For example, a series of ERPs and standard deviations can be
obtained over a range of stimulus intensities or output amplitudes (as
appropriate), the dependence of wave shape on intensity noted, and a range with
optimal variance chosen for further study such that there is an optimal
covariance with behavior (Fig. 3). It may also prove useful to adjust the
stimulus intensity to maximize the non-uniformity of the second moment with
respect to ERP time (Fig. 1).

Fig. 3. Two sets of ERPs (dotted
curves) are shown from the olfactory bulb on stimulation of (right) the lateral
olfactory tract (LOT) and (left) the primary olfactory nerve (PON). From above
to below the stimulus intensity is raised in steps, which changes the amplitude
and shape of the ERPs. Solid curves: sum of fitted basis functions. Dashed
curves: dominant and subsidiary components (respectively ‘signal' and
'clutter' - see Section 18.6). (From Freeman 1975.)
Typically we have some
control over the correspondence between the spectral peaks of the ERP and EEG
because we can change the stimulus rate or intensity which will change the
spectrum of the ERP. The most likely result of increasing the stimulus
intensity is an increase in amplitude of the ERP above the EEG and a decrease
in the frequencies of the ERP (Fig. 3), which is reflected in a prominent
spectral shift (Fig. 2). This makes an ERP much easier to retrieve from the
background activity, but it also decreases its variance. This may be an
instance of throwing out the baby with the bath water, because in attempting to
observe the signal, we may excessively reduce the correlated variance as well.
The Fourier transform
of an ERP or AERP also provides a basis for estimating the amount of
information that can be extracted. The phase spectrum should be displayed along
with the gain spectrum preferably in the form of a polar plot (Fig. 4). Each
peak or trough in the gain spectrum may represent a characteristic frequency
(called a 'pole') or a null (called a 'zero') in the system (Appendix B). We can
deduce the order of the system from the goodness of fit of curves to the data
in both the time and frequency domains, i.e., the number of simultaneous first
order differential equations to be evaluated. Each 90° of phase lead or lag
will require a first order differential equation in the set needed to describe
the dynamics, or equivalently yet another term in an n-th order equation. In
the example in Fig. 4 the polar plot can be viewed as the track of the tip of a
vector that rotates clockwise around its base at the origin from low to high
frequency. It sweeps through 6 quadrants comprising 540°; the neural system
is minimally sixth order. The goal of curve-fitting at this stage is not
parsimony (the smallest number) but evaluation of as many rate coefficients as
are indicated by the system. If the neural system is operating in a linear
domain, each term or equation will represent a real dynamic transformation. If
it is not, then some of the terms or equations will reflect the dynamics
spuriously. For example, a saturation non-linearity may give rise to harmonics.

Fig. 4. Above left: ERP from a cat with implanted electrodes (dotted curve) fitted with sum of basis functions (solid curve). Above right: amplitude and phase of the two curves at left after Fourier transform by numerical integration. Below left: polar plot of the Fourier transform. Lower right: dominant and subsidiary components, which are subsets of basis functions comprising the curve fitted to the ERP. (From Freeman 1975.)
Linearization is principally desired by the fact that the curves comprising the solutions to linear differential equations include pulses, steps, ramps, exponentials, sines, cosines, damped sine waves, and several other elementary wave-forms. This may be called the 'family of linear basis functions.' There are numerous electrophysiological systems at both the single neuron level and the level of masses of neurons for which the dynamics in certain ranges can be described with linear differential equations. On driving by electrical impulses each output must then consist of the sum of a set of linear basis functions. The Fourier transform is an example of linear decomposition of a signal into sinusoidal basis functions; it is most effective when the system that generates the signal is operating in a linear range.
At this stage we
return to the experiment and again carry out careful parametric testing (which
presumably has already been done), i.e., systematic variation of stimulus
interval and intensity (as appropriate) to determine where linear ranges of
function exist (Freeman 1975, Ch. 2) in which additivity and proportionality
hold. An example is shown in Fig. 5 of the ERPs from single-shock responses
recorded in the hippocampus on electrical stimulation of the fornix (Horowitz
1969). Over a range of low stimulus intensities (a-c) the ERP increases in
amplitude without change in its form (proportionality). Over a middle range
(d-h) the generic character of the ERP is invariant (approximating a damped
sine wave), but the frequency and decay rate of the oscillation change as the
initial amplitude increases. At the highest stimulus level shown (i) the ERP
changes to a new generic character. The 3 ranges are linear, piece-wise linear,
and non-linear.

Fig. 5. ERPs are shown from the
ventral hippocampus at increasing amplitudes of single shocks given to the
dorsal fornix. (a) 2.5 V, N = 6600; (b) 3.0 V, N = 3600; (c) 4.0 V, N = 1800;
(d) 5.2 V, N = 850; (e) 7.0 V, N = 650; (f) 9.0 V, N = 510; (g) 11.0 V, N =
417; (h) 15.0 V, N = 357; (i) 20.0 V, N = 290. Duration of each ERP is 125
msec. (From Horowitz 1972.)
Alternatively we may
systematically explore the background conditions for recording. An illustration
of this procedure is shown in Fig. 6. The set of ERPs is taken from a cat with
stimulating electrodes in the optic tract and recording electrodes in the
superior colliculus. The cat is placed in a light-tight box and the uppermost
ERP is taken. Thereafter the ERP is taken at the designated times during
presumptive dark adaptation. Control sequences are taken in the same box with
illumination to control for the effects on the ERP of habituation, changes in
motivation, etc. (Pickering and Freeman 1967). The sets of ERPs from the
hippocampus and superior colliculus resemble damped sine waves. The degree of
conformance is tested by fitting to each one a curve generated from the
equation for a damped sine wave. The fit is rather close over the linear (Fig.
5, a-c) and near-linear (Fig. 5, d-h) ranges for the hippocampal ERPs (for
example, lower frame in Fig. 7) but not for the non-linear range (Fig. 5, i).
The collicular responses conform only when the initial positive peak (Fig. 6)
is excluded from the curve-fitting procedure (Fig. 7, upper frame). In both
sets the frequency, decay rate and phase of the damped sine wave change in
relation to the antecedent variable. Readers may profitably compare these
illustrations of ERPs from the olfactory bulb and cortex, the hippocampus, and
the superior colliculus with examples commonly seen in the literature and with
the common varieties of human ERPs (Ch. 5) in order to see how much can be
learned by the systematic search for linear domains.

Fig. 6. A set of ERPs is shown from a cat with electrodes chronically implanted to stimulate the optic tract and record from the superior colliculus. At the time of the upper ERP the cat is placed in a dark box, and thereafter the ERP is taken at the times indicated. The frequency of the ERP increases slightly and the decay rate decreases during dark adaptation (Pickering and Freeman 1967).
18.6. Fitting curves and testing
the results
Each basis function is
specified by an algebraic term containing one or more coefficients, and the sum
of basis functions is generated by the sum of the terms. The next step is to
fit the sum of basis functions to an AERP. This entails finding the proper
values of the coefficients by curve-fitting. A number of standard computer
procedures are available for this. The most useful procedure is non-linear regression
(Golub and Pereyra 1973; Kaufman 1975; Freeman 1975, pp. 103-106), in which all
of the coefficients (usually 4-10) are simultaneously adjusted. There are 5
tests that must be passed for provisional acceptance of a fitted curve.

Fig. 7. Damped sine wave curves are fitted to the ERPs from the superior colliculus (above) and hippocampus (below) to measure frequency, decay rate, phase and amplitude. (From Freeman 1980.)
The first and most
basic criterion for determining the optimal values for the coefficients is
minimization of the sum of squares of the differences between the AERP and the
sum of basis functions. The ratio of mean square differences to mean square
data should be well under 5%. Typically a first attempt yields an
unsatisfactory match, and repeated trials must be made while adding new terms
or changing existing terms. A successful outcome of the first test is when the
residue on subtracting the fitted curve from the AERP resembles white noise or,
better still, the appearance of records of averages over trials on which no
event occurred.
A second and essential
test of such a fitted curve is to fit the same curve to each of the ERPs that
comprise the AERP. Here the basis functions are adapted, in that the values of
their coefficients are optimized to fit each subaverage. If this cannot be
done, the most likely reasons are that the basis functions were not properly
chosen to reflect the variation, or that averaging was sufficiently destructive
to remove certain components, or that one or more components occurred on some
trials and not on others. Either a new matching set of basis functions must be
sought, or the ensemble must be divided into subsets on the basis of the
results on hand.
The third test of
whether the decomposition is effective lies in study of the relations between
sets of coefficients and concomitant measurements of behavioral variables. When
the experimental conditions have been fixed, we should observe
‘spontaneous' variation of the coefficients from trial to trial. When a behavioral
factor is varied, some further variation of coefficients should appear. In both
cases the values for each coefficient should be 'well-behaved' in the sense
that they fall into a unimodal distribution (not necessarily normal), and that
we can see patterns of covariation within the matrix of coefficients.
The patterns of
covariation between coefficients are best explored with a graph of each pair to
determine the ranges and distributions, and the form of the relation.
Three examples are
shown in Fig. 8. The upper frames show the AERPs from 3 cats (triangles), the
fitted curves (solid), and the dominant basis function and clutter (dashed
curves). The lower frames show the values for the frequency and decay rate of
the ERPs plotted each as a triangle. The regression line for each set is
flanked by the 95% confidence intervals (dashed curves). Also, negative
correlations hold between amplitude and both frequency and decay rate; the
arrows indicate the direction of increasing ERP amplitude. Whenever they are
needed, suitable transformations should be sought to normalize the
distributions and to linearize as many of the relations among the coefficients
as is feasible (see Ch. 16). Then factor analysis with Varimax rotation is used
to characterize the dimensionality of the patterns (Emery and Freeman 1969)
(see Ch. 5 and 16).

Fig. 8. Three examples are shown in
the upper frames of AERPs (triangles), the sum of basis functions (solid
curves), and the dominant component and clutter (dashed curves). The recording
sites are monopolar on the surface of the olfactory bulb; the stimulus sites
are the primary olfactory nerve (PON). The frequencies in radians/sec are
plotted against the decay rates in I/sec of the component ERPs in the 3 lower
frames (see Appendix B). The ERPs in the left frame are collected concomitantly
from 64 electrodes in an 8 X 8 array; the decay rate decreases in proportion to
the increase in response amplitude (arrow) at fixed stimulus intensity. The
stimulus is increased stepwise for the other two sets of ERPs (increasing
amplitude in the direction of the arrow). Each solid line shows the regression
line; the dashed curves show the 95% confidence limits. The variation in the
slope of the relation between frequency and decay rate is analyzed elsewhere
(Freeman 1975, Ch. 6); the product moment correlation between frequency and
decay rate does not by itself adequately describe the relationship. The small
circle on the abscissa shows the average decay rate of the bulbar ERP under
deep anesthesia, when the EEG is suppressed and the bulbar evoked potential
becomes non-oscillatory; this 'open loop' response is discussed in Section 18.7
and is illustrated in Appendix A.
The fourth test is to
determine whether the same set of basis functions can be applied to the ERPs
from several subjects, and whether the same factors emerge from the matrix of
coefficients. Here we must come to terms with between-subject variability. It
should now be possible to fit the ERPs of considerable variety of shape with the
same sum of basis functions, though the mean values of the coefficients differ
significantly. Alternatively it may be necessary to add, delete, or change
terms within the sum. It is reasonable to postulate that the same neural
mechanisms operate in all subjects under study, but that their manifestations
in the form of ERPs may undergo distortions in differing ways or be overlapped
by subsidiary events in unpredicted ways. If we can identify one or more
components that are always present (though variable in shape), we may
characterize this subset of basis functions as a signal and treat the other
sporadic basis functions as background 'clutter.'
There is another way
of looking at the problem of extracting behaviorally relevant information. The
procedure of curve-fitting is essentially the design of a matched filter to
detect a desired signal against a white noise background. Any one basis
function or any subset of them within a set comprising a fitted curve can be
specified as a filter that is matched to a signal. Then the remaining basis
functions serve as a filter that is matched to events in the ERP other than the
desired signal.
For example, the ERP
in Fig. 4 has 2 damped sine wave components. The larger one is a manifestation
of the response of an intracortical negative feedback loop in the olfactory
cortex to single-shock stimulation, that is manifested by a reverberation
between sets of excitatory and inhibitory neurons. This is the signal. The
smaller component is the manifestation of a number of complicated feedback
loops that include or project onto the intracortical loop, including neurons in
the olfactory bulb, nucleus and tubercle, and possibly recurrent projections
from the cortical efferent systems. The contributions to the dynamics of those
longer pathways are not easily distinguishable from each other, but the sum of
their effects can be approximated in form by a damped sine wave. This is the
'clutter.' When the cortical dynamics change, both the signal and the clutter
vary, and the two filters are adapted (by curve-fitting) simultaneously to
reflect the change. To a certain extent the variations in the two filters are
correlated, as they should be, because they both involve the intracortical
feedback loop.
We can expect that for
differing stimulus sites or different subjects the category of the signal will
be invariant. That is, the equation for the dominant component is always a
damped sine wave, though the values for the coefficient are variable. However,
the form of the clutter may vary, meaning that the equation for the sum of the
other subsidiary basis functions may vary as well as the values of the
coefficients (Fig. 3, left and right frames).
The use of subsidiary
basis functions can be regarded as a pre-whitening transformation of the ERP,
before the AERP filter is adapted to ERPs in order to recover the desired
signal. In the interest of economy, if the ranges of the frequencies of the
filters for the signal and the clutter are sufficiently far apart, the coefficients
of the filter matched to the clutter in the AERP may be fixed, so that only the
coefficients of the filter for the signal are varied during adaptation to the
signal by non-linear regression. The variance of the dominant component in
relation to behavior may still be optimally preserved.
The fifth and
ultimately most important test is correlation with behavior. The underlying
hypothesis is that the electrical signs in each part of the brain depend on
neural activity of that part, and that some albeit undefined aspects of
on-going behavior also depend on that part, because the intact brain functions
as 'an organic whole.' Our own choice for a 'behavioral touchstone' is to
measure the rate of work done by hungry cats for food in an ergometer over a
period of 10 sec that is required to derive each ERP (Freeman 1962b). The ERPs
are fitted with curves consisting of 2 damped cosines, yielding values for 8
coefficients. From a total of 30 trials, 30 sets are collected from each cat.
The sets of 8 X 30 values are introduced into a set of 30 simultaneous linear
equations with 8 ERP coefficients as the independent variables and the rate of
work as the dependent variable. Then we calculate the multiple correlation
coefficient R2 to evaluate the fraction of the
total variance of rate of work that can be predicted from the ERPs. The
criterion for the optimization of the process of measurement is the
maximization of R2 (Freeman 1964). Upon completion of
the development the fraction ranges from 0.19 to 0.55 among 7 cats; on the
average 36% of the variance in rate of work for food is predictable from the
ERPs of one prepyriform cortex. We conclude that the ERP data are optimally
cast in forms suitable for neural modeling.
From this example, the
desired properties of the behavioral touchstone are that it be an event which
extends through the time course of an evoked potential (or a set of them for an
ERP), which is continuously variable in magnitude, and for which the magnitude
is determined by brain function, whatever might be the antecedent conditions
(e.g., food deprivation). Further, the real numbers in which events are
expressed should be normally distributed on an ordinate scale. The development
of such a criterion may tax the ingenuity, but the reward is reliable data.
18.7. Models of the dynamics of
neural masses from ERPs
In this section we
consider procedures used to explain the shapes of ERPs in terms of the
anatomical and physiological properties of neurons. The properties we rely on
are well known to hold for almost all types of neurons; no special or unusual
characteristics are needed. In the spirit of an introductory review we restrict
consideration to ERPs that accrue from electrical stimulation, that conform to
superposition under paired-shock testing, and that are fitted with sums of
linear basis functions. In this circumstance each basis function is the
solution to a differential equation that can be found in a table of
mathematical functions.
The differential
equation is not in itself a model; it must be structured so as to represent
some aspect of the dynamics of the neural system generating the ERPs. For
example, let us suppose that one of the basis functions for potential v is a
damped cosine as a function of time t (Fig. 8)
![]()
where v0 is the amplitude in microvolts, w is
the frequency in radians/sec (2π times the frequency in Hz), f is phase in radians, and a is decay
rate in 1/sec (the time constant is 1/a msec). The generic differential
equation for the damped cosine is
![]()
where v (with dot above) = dv/dt, I is the magnitude of an input impulse ∂(t)
including a scaling parameter, and b1 and b2
are coefficients
that are interpreted in a worked example below.
It is not sufficient to
state the obvious that an 'oscillator' exists in the neural system; we would
like to determine whether it is within or between neurons. In order to learn
this we must set up two hypotheses in the form of models, one to describe an
oscillation of non-interactive neurons, the other to describe the oscillation among
sets of interactive neurons. We must use each model to make predictions about
ERPs and PSTHs in order to validate or reject the hypotheses. We know on the
one hand that under restricted, controlled conditions an isolated nerve can
generate a damped cosine fluctuation of membrane potential in response to a
brief shock (as distinct from a periodic pulse train). The Hodgkin-Huxley
equations admit to corresponding solutions, but they are far from robust. On
the other hand we know that cortical excitatory neurons that are excited by an
afferent volley, in turn excite inhibitory interneurons, and thereafter receive
synaptic inhibition. A typical diphasic cortical evoked potential manifests an
extracellular compound EPSP followed by a compound IPSP, both generated by the
excitatory neurons, the IPSP mediated by the interneurons. This phenomenon is
quite robust. Our aim is to devise a model to simulate a hypothetical process
in which the diphasic ERP manifests the impulse response of a neural negative
feedback loop. That is, the feedback interaction within masses of excitatory
and inhibitory neurons is described by a linear differential equation, and the
solution of the equation with impulse input must give us a curve that closely
fits the ERP.
The best way to analyze
the neural mass is to open the loop and measure separately the passive membrane
time constant ae of the excitatory cell mass and that
of the inhibitory cell mass ai.
The loop is opened by inducing very deep anesthesia to suppress the EEG and
render the ERP non-oscillatory. What we observe is the compound EPSP of the
excitatory cells without the following IPSP. With further search we then find a
means to deliver an electrical stimulus to excitatory axons ending synaptically
on the inhibitory interneurons to elicit the interneuronal compound EPSP (not
the IPSP). We fit curves to these ERPs in the same manner as for other ERPs
(Appendix A).
For illustrative
purposes we begin with a first order approximation; we ignore the rise time and
consider only the decay. The potential Ve as a function of time for the EPSP of the excitatory mass is
![]()
and that for the inhibitory mass vi is
![]()
where as before I is the magnitude
of an input pulse, ae and ai are rate coefficients measured by regression, and ve and vi represent the time courses of the active states of the two
neural masses. These are known as the state variables of the two neural masses
making up the hypothetical neural system being considered (Freeman 1975, pp.
34-36).
Experimentally we find
that the rate constants of the two masses of cells are equal, so we set a = ae = ai, and the differential equations in the open loop state
become

For the waking 'closed loop' state
the inhibitory mass receives its input not from a stimulus directly but from
the output of the excitatory mass.
![]()
where ke is a forward gain coefficient
introduced to express the strength of action of the excitatory mass onto the
inhibitory mass. The excitatory mass receives both the initiating pulse input
and the output of the inhibitory mass.
![]()
where ki represents the strength of action of
the inhibitory mass onto the excitatory mass, and the sign (-) denotes the fact
that the action is inhibitory. We combine Eqs. 7 and 8 to find an expression
for each of the two state variables. We do this by taking the derivative with
respect to time of both sides of Eq. 7, solving Eq. 8 for ve, and using Eq. 7 to define Ve
![]()
and similarly for v, where Kn = kekI is defined as the negative feedback
gain. Eq. 9 should be compared with Eq. 2 in order to see the way in which the
coefficients b1 and b2 have been evaluated.

The two roots of Eq. 9 by the
quadratic equation are

so the solution for the inhibitory
state variable is
![]()
By using Euler's formula,
![]()
and by defining a term for phase f,
![]()
we predict the output of the
inhibitory mass for impulse input to the excitatory mass.
![]()
By the same procedure the output of
the excitatory mass is
![]()
For both state variables the decay
rate of the predicted outputs in Eq. 1 is the same as the open loop rate
constant a, and the frequency w = Kn0.5 is the square root of the negative feedback gain.
Importantly, the oscillation of the excitatory mass (fe = 0 radians) leads that of the inhibitory mass (fi = π/2 radians) by one quarter
cycle, if ke = ki, or with some further lead or lag if they are unequal
(Appendix B).
This result means that
a necessary (but not sufficient) condition for the interaction hypothesis (as
distinct from the single neuron hypothesis) to hold in cortex is that the
oscillatory activity of excitatory and inhibitory neurons must have the same
frequency and decay rate in each time epoch, but that the one must lead the
other on the average by a quarter of a cycle. This condition has been found to
hold in the olfactory bulb, prepyriform cortex, and hippocampus (see Appendix A
for an example). It should be noted that the frequency and decay rate serve to
evaluate the closed loop rate constants of the system of excitatory and
inhibitory neurons. This is distinct from the open loop rate constants defined
in Eqs. 3 and 4, that were evaluated in the open loop state under deep
anesthesia.
However, the solution
of this elementary model further predicts that the decay rates a are equal for
both open and closed loop responses. This prediction immediately fails; for
example, the decay rate of ERPs in the bulb and cortex under deep anesthesia is
near -220/sec, whereas the decay rates of ERPs from waking animals range from
near zero to less than -150/sec (Fig. 8). This result means that the closed
loop gains Kn cannot be estimated directly from
the frequencies W2
Of ERPs by use of
this model.
The basis for the
failure of this elementary model is 3-fold. First, the first order
approximation for the open loop EPSP includes only the passive membrane decay
rate and not the rise time. It is essential for the theoretical studies to use
at least a second order differential equation in order to include the cable
properties of dendrites (Appendix A), and for modeling ERPs it is desirable to
use a third order approximation that includes synaptic and axonal delays as
well (Freeman 1975, pp. 314-321). The resulting equations are cumbersome, but
the procedures for solution are basically the same.
The second reason is
that the use of a single gain coefficient ke or ki
does not allow us
to separate the contributions to overall gain of the operations at synapses and
at trigger zones. Each mass of non-interacting neurons in parallel (a KO set
see Section 18.1) performs 4 operations in series: conversion of pulse input to
synaptic current, dendritic integration, conversion of the integrand to pulses
at trigger zones, and axonal transmission. Of these only the conversion at
trigger zones is non-linear. For masses of neurons this function is sigmoidal
(Appendix C); for any specified low-level stimulus the function can be
approximated by a straight line with slope g. This action of replacing the
non-linear operation in an equation for the KO set is known as linearization;
when the replacement is done over a range of inputs with a different value of g
in each part of the range, the procedure is known as piece-wise linearization.
We find experimentally that this non-linear function is the rate-limiting step
in neural feedback loops that holds the other operations within their linear
domains. For this reason we represent the synaptic gain from the i-th to the
i-th neuron or subset of neurons by a coefficient kii, and within local spatial domains
of short axons we combine the time delays of axons and dendrites into one
linear differential equation. The overall forward gain is the product kijgj.
The utility of this
formulation lies in 3 experimental findings, namely that the open loop rate
coefficients do not vary in relation to behavioral changes or to the induction
of anesthesia, that the coefficients gj vary in relation to level of arousal or motivation and also to stimulus
intensity, and that the coefficients kij change in relation to conditioning, including associational
learning and habituation. In brief, the closed loop rate constants from ERPs
change markedly in relation to behavioral variables, but this is the result of
selective changes in synaptic and trigger zone sensitivities and not of changes
in the open loop rate constants.
The third reason is
that negative feedback is not the only type of feedback in cortex. To be sure
it is a major feature of the excitatory and inhibitory neurons in the cortex,
but there are also varying degrees of mutual excitation and mutual inhibition
that constitute two forms of positive feedback. An effective approach to this
problem is to describe the mutually excitatory mass of cells as a KI, set, the
mutually inhibitory mass as a kij set,
and their interaction by negative feedback in a KII set as the basic dynamic element
of cerebral cortex (see Section 18. 1). The topologies of connection of the KO,
KI, and KII sets as they are found in the olfactory bulb are presented in Fig.
9. The key step in the analysis of the KI set is to treat it as the interaction
of two KO sets having the same sign of action. This allows representation of
the feedback gain by a coefficient Ke = kee2 or Ki = kii2 and it avoids the inclusion of
self-excitation and self-inhibition, which are inadmissible on anatomical and
physiological grounds. The negative feedback gain is Kn keikie as before.

Fig. 9. At left is shown a schematic
flow diagram for the olfactory bulb. The receptors (R) form a KOe set that is excitatory to the bulb (+). A KIe mutually excitatory set represents the periglomerular (P)
cells in the outer bulb. A KIIMG set represents the mitral (M) and
granule (G) cells in the inner bulb, with output from the bulb to the cortex by
mitral axons. In the center is shown the equivalent circuit when the KI and KII
sets are replaced by KO sets with the appropriate 3 types of feedback (+ +, -
-, and + -). At the right are
shown the prototypical time courses for the KO, KI and KII masses. e, excitatory, i, inhibitory; t,
transmitting; r, receiving. (From Freeman 1975.)
The minimal representation
of the dynamics of the lumped KII set is by 4 coupled second-order differential
equations. Two state variables are required for each of the 4 component KO
sets; these are to represent its activity as a function of time in the
dendritic wave mode v and in the pulse mode p. The relations between these two
forms of the active state are experimentally analyzed from extended time series
(10-20 min) of digitized (1 msec) EEG activity from a defined KII neural mass
and concomitantly recorded pulse activity from a single neuron in the same KII
mass. The amplitude histogram of the entire set of digitized EEG values is
formed. The conditional pulse probability is defined by the ratio of the number
of pulses that accompany the EEG amplitudes in a given bin of the histogram to
the number of amplitude entries into that bin. It is determined over a range of
EEG values from -3 to +3 S.D. It is normalized by dividing each value by the
mean pulse probability. The procedure is repeated with successive time lags in
both directions between the EEG trace and the pulse train, in order to allow
for intrinsic delays within the generating mechanism (Freeman 1975). The
sigmoid curve (Appendix C) is fitted to the normalized conditional pulse
probability in order to evaluate the non-linear gain. In the linearized model
the state variables in the pulse p and wave v modes are related by p = gjv.
When this function has
been evaluated, the state variables may be cast either in the wave mode or in
the pulse mode. In the olfactory bulb and the KIIMG mass the activity of the excitatory mitral (M) cells is
normally observable only in the pulse mode in the form of pulse trains and
poststimulus time histograms (PSTHs), and the activity of the inhibitory
granule (G) cells is observable only in the wave mode in the form of EEG waves
and ERPs. These are the forms in which events are obtained for testing and
evaluating the gains within the KII set (Figs. 3 and 8 and Appendix A).
The evaluating
procedure consists of setting a reference gain called K0 at which Kn = Ke = Ki
in the linearized
KII equations and solving them for a median value of K0 = 2.0 (small rectangle in Fig. 10).
Then the 3 linearized gains are changed in small steps according to certain
rules expressed in subsidiary equations that we call describing functions
(Freeman 1975). The frequency and decay rate of the solution change in a
consistent way that allows us to plot a curve of decay rate vs. frequency (Fig.
10). This is repeated for different values of K0 giving families of curves such that, if we have the
frequency and decay rate from an ERP or PSTH, we can estimate the linearized
gains from a graph. The describing functions are devised in accordance with
hypotheses about the effects on the KII gains of changing the stimulus parameters,
of administering anesthetics or other drugs, or of training animals with
implanted electrodes so as to manipulate attention, motivation, or other
behavioral variables (Freeman 1975). Two examples are taken up in the next
section. To reiterate, the most important result here is that frequencies and
decay rates of ERPs and PSTHs serve to evaluate neural sensitivities, provided
that a valid model is used.

Fig. 10. The triangles show the
frequencies and decay rates from sets of ERPs that are derived by adapting to
them the matched filters from their AERPs. The curves represent extrapolations
from evaluations of the frequencies and decay rates of repeated solutions of
the equations of the lumped, linearized KII model for differing values of the
gain coefficients that are specified by two sets of describing functions (see
Ch. 6 in Freeman 1975). Right frame: the data show the effects of increasing
the stimulus intensity in small steps. One factor suffices to describe the
results for each subject and session, but two other factors are needed to
account for differences between subjects and sessions. Left frame: the data
show the values from one subject and session with stimulus intensity fixed near
threshold ('spontaneous' variation). Two main factors are apparent from factor
analysis of the coefficients from the adapted filters; their independent
effects are shown by means of the family of curves. Each curve is generated for
a value of a reference gain K0 that is increased in steps of 0.5
(small rectangle at K0 = 2) and that represents increasing
arousal. The curve that runs upward to the right is the locus of values for K0 = Kn = ke = ki with its origin at w = 0 and a = -220/sec. The position of
points on each curve is determined by a mutually excitatory gain ke that represents increasing selective attention with
decreasing frequency. In both graphs the vertical line shows the border for
stability. The diagonal line at the top shows a boundary that reflects onset of
another form of instability; it occurs by the existence of a pole on the
abscissa to the right of the origin for certain combinations of the gain values
for Kn Ke and
Ki. The generic properties of this
family hold over subjects and sessions, but the degree of curvature varies in
accordance with another parameter in the linearized KII equations (Freeman
1975, pp. 355-378).
18.8. Using ERPs to evaluate the
stability of neural masses
Each part of the brain
is, directly or indirectly, under ceaseless bombardment from sensory input, as
well as from the activity generated by internal dynamic processes. Each part
must have the property of maintaining its integrity and status quo under most
kinds of external and internal activation, but it must also be capable of undergoing
changes to different states when the appropriate circumstances arise. In other
words, it must be stable under most kinds of perturbation, but it cannot be
absolutely stable, or it would be incapable of participating in the
evolutionary processes that underlie behavior. In this section we take up the
problems of how to make quantitative estimates of the degree of stability of a
neural mass by measuring its ERPs, how to determine the conditions in which
instabilities might occur relating to arousal and attention, and how to predict
the forms they might take.
Any number from half a
dozen to over 100 ERPs can be measured from their common AERP. Each ERP yields
a value for each of the several coefficients representing the amplitudes,
frequencies, phases and decay rates of the component basis functions. Of these
coefficients the most crucial in respect to stability are the decay rates of
exponential curves and damped oscillations, or more particularly for the
latter, the ratio of frequency to decay rate. The most useful graphic display
is the decay rate of each basis function plotted on the abscissa against its
frequency on the ordinate as in Figs. 8 and 10, with zero frequency for
exponential terms. Fig. 11 shows prototypes of linear basis functions with various
frequencies and decay rates, each positioned in the approximate location of its
point in these coordinates.

Fig. 11. The relationship is shown
between wave shapes of ERP components and the values for frequency w in
radians/sec and decay rate a in 1/sec. Each trace is an example of a component
100 msec in duration that is centered at the point for its w and a. For
example, the upper sine wave has w 200 radians/sec (31.8 Hz) and a = 0/sec.
(From Freeman 1975, pp. 278-284.)
The outstanding feature
of this display is the fact that the sign of the decay rate shows whether the
neural mass has responded to an input in a stable or an unstable way. If the
decay rate is positive, the output in response to, for example, a single shock
does not decay to zero but continually augments. If the output for a brief
input is a steady-state voltage or a maintained oscillation, the neural mass is
marginally stable. Only if the decay rate is negative and the response decays to
the prestimulus baseline after the input has ended can the system be described
as stable, whether or not the response is oscillatory.
The experimental
conditions in which ERPs are taken preclude direct observation of an
instability, because we require that the potential return to baseline after
each stimulus, and before we give the next one. Therefore, all of the decay
rates must be negative. However, the more strongly negative the decay rates
are, the more stable the system is, and conversely the closer a point
representing the frequency and decay rate of an ERP lies to the line for zero
decay rate, the less stable is the system. The pattern of the collection of
points from a set of ERPs may suggest the experimental conditions in which an
instability may arise, and the frequency or rate of change that will then be
manifested.
There are two kinds of
instability revealed in such patterns that are particularly important. One
predicts the onset of an epileptiform seizure and the other one the appearance
of EEG waves.
A set of values from
ERPs is shown in Fig. 10 (right frame) by the triangular plotting symbols. As
in Fig. 11 the vertical line shows zero decay rate. The set is taken while
increasing the current strength of the stimulus in small steps. There is
successive increase in amplitude, decrease in frequency, and increase in the
negativity of the decay rate of the damped cosine wave fitted to the ERPs as
indicated by the downward arrow. This result shows that minimal stability
occurs with minimal input intensity and minimal response amplitude. When the
peak amplitude of the single shock evoked potential rises above the level of
the ongoing EEG, the response of the neural mass indicates that the system is
made more stable in proportion to the magnitude of the impulse input.
This is a common
response configuration observable in all parts of the cerebrum. It manifests a
simple and reliable neural mechanism for maintaining the stability of each part
in the face of massive but brief overload. It occurs when the system is
saturated by excessive input. The initial excitation of excitatory neurons by a
large impulse input is virtually unlimited, and their output is given pari
passu to inhibitory interneurons. However, the effectiveness of the inhibition
back onto the excitatory neurons is limited to the amount of pre-existing
background activity. Once the excitatory neurons have been shut off they cannot
transmit their degree of further inhibition; they saturate at threshold,
because pulse rate goes to zero and cannot be negative.
This mechanism can be
modeled by a negative feedback system in which the feedback gain is reduced in
proportion to the response amplitude and thereby the driving input. The curves
in Fig. 10 (right frame) show the solutions for such a model (the KII set) for
a set of values of the level of pre-existing background activity expressed in KO. The rectangle shows the reference
point for KO = 2.0; each curve predicts the
frequencies and decay rates of a set of ERPs with increasing stimulus intensity
and with a persisting level of background activity between successive
responses. The curves form a family in which the system is made more stable
with an increase in the input intensity whenever the single shock evoked
potential rises above the EEG activity.
The same equations
that predict the form of the ERP also predict that at very high stimulus
intensity one of the components of the ERP should be an exponential term, for
which with increasing input intensity the decay rate goes to zero and then
becomes positive. That is, the system is predicted to become unstable. This has
been observed under massive repeated single shock stimulation of the
hippocampus, prepyriform cortex, or septum, leading to the onset of a petit
mal-type seizure in waking animals (Freeman 1962a). Further quantitative
modeling of this phenomenon is needed, as well as study to determine whether it
also occurs in neocortex (Freeman 1986, 1987).
It is now obvious that
to increase the stimulus intensity in order to make an ERP more visible is to
render abnormal the neural dynamics under study. Yet the tendency of the ERPs
to vary in their shapes increases at near-threshold stimulus intensities. We
take advantage of this variation by collecting sets of ERPs under fixed
stimulus intensity and minimal behavioral variation. The sets of points show
the 'spontaneous' or background variation, and thereby they reveal something
about the properties of the neural mass. An example in Fig. 10 (left frame)
shows a set of values for the frequency and decay rate from the olfactory bulb
of a cat. As before, all of the decay rates are negative, but here we find that
the pattern of variation is not the same as that with changing the stimulus
intensity.
Two factors dominate the variations in
the shapes of these ERPs. One is the level of arousal or motivation that can be
increased by such measures as food deprivation. This results in increased
background activity that is manifested by increased rates of background single
unit firing, by augmented amplitude of the EEG, and by corresponding changes in
ERPs and PSTHs from the bulb and cortex. These effects are simulated in the
output of the linearized KII model by increasing the reference gain coefficient
K0 above 2.0. By the criterion of
decay rate this decreases the stability of the system. Each curve of the family
of curves in Fig. 10 (right frame) is generated for a particular value of K0 increasing to the right (Freeman
1975, pp. 370-378).
The second factor is
one that we identify with the degree of attentiveness to the evoking stimulus.
We do this by implanting electrodes in the olfactory tract and prepyriform
cortex of cats, training them to respond to electric stimuli used as
conditioned stimuli under reinforcement, and applying factor analysis with
varimax rotation to the sets of coefficients of ERPs taken before training,
after training, and after extinction of a conditioned response (Emery and
Freeman 1969). The factor pattern that emerges and that is related to
attentiveness by analysis of variance consists of concerted changes in phase,
frequency, amplitude and decay rate of the ERPs. We simulate this pattern
change in the impulse response of the KII set by increasing the values for the
mutually excitatory gain coefficients kee. other change in the model suffices (Freeman 1979b). Each
curve in Fig. 10 (left frame) is generated by increasing ke, for fixed K0 causing increasing response
amplitude and decreasing frequency (downward arrow). The decreasing negativity
of decay rate implies decreasing stability of the model; correspondingly the
less negative decay rates of the ERPs imply lessened stability of the KII mass
in respect to the evoking electrical stimulus under reinforcement as learning
takes place.
We also find that the
curves in the left frame correspond to the factors traced out by sets of
frequencies and decay rates from ERPs undergoing 'spontaneous' variation (Fig.
10, left frame, triangles). We infer that the expressions of independent
properties of the neural KII mass relating to arousal and attention (whether or
not the subjects are attending to the stimulus) are subject to random
variations in respect to the timing of the stimulus trains (Freeman 1975, pp.
386-390).
These curves differ
from those in the left frame in an aspect that has major importance. Whereas
all the curves in the left frame cross the vertical line from right to left
with increasing response amplitude (arrows), some of the curves in the right
frame cross the vertical line from left to right with increasing amplitude.
Those that do so have relatively high values of K0 which are associated with increased arousal, and the parts
of the curves that cross to the right have relatively high values of kee, which are associated with
selective attention. According to the stability criterion these curves imply
that the combination of arousal and attention may cause the KII mass to become
unstable, when the stimulus that is attended actually arrives. That is,
oscillation might be initiated that would augment rather than decay.
This cannot be observed
with the evoked potential method; simulations with the non-linear KII model (to
be discussed in the next section) show that single shocks are too brief to
allow this instability to occur. Even if it did, the fluctuations in phase and
frequency of its onset would lead to destructive averaging, causing the
appearance of a faster decay rate for the ensemble average than those for
single responses. However, in aroused, attentive animals we observe that with
each inhalation the inputs to the bulb and prepyriform increase owing to
augmented receptor input, and we know that then an oscillatory burst commonly
occurs in the EEG of the olfactory bulb and cortex (Fig. 12). The modal frequency
of the oscillation found in cats is 40 Hz (250 radians/sec divided by 2π),
which corresponds to the convergence point of the curves in Fig. 10 (left
frame) where they re-cross the vertical line from right to left with increasing
amplitude. (These curves are derived from ERPs in cats; the simulation of the
modal gamma activity in rats and rabbits that occurs more often in the range of
50-70 Hz is done by adjusting the gain values.) Intuitively this suggests that
a small fluctuation that is initiated in this condition might grow in amplitude
at the indicated starting frequency, but that as it grows its frequency might
decrease in concert with the increase of amplitude, until it re-stabilizes at a
steady frequency and amplitude of oscillation. During exhalation there is
cessation of receptor input, allowing the oscillation to end. That is, the
neural mass can be inferred to switch from one stable state to another and back
again with each cycle of respiration. This pattern of function cannot be
described quantitatively with linear approximations. It requires simulation
with an explicitly non-linear model. We take this up in the next section, where
we explore the physiological basis for gamma activity in the range of 35-90 Hz.

Fig. 12. A: the upper trace shows respiration of a waking
rabbit measured with a pneumograph; the lower trace is an EEG from the
olfactory bulb. Characteristically there is a surface-negative wave that peaks
after each inhalation; riding on the negative crest is a brief burst of gamma
activity. B: the upper trace shows the air flow through the nose of an
anesthetized cat with a respirator connected to the distal end of the trachea;
respiration occurred at an independent and higher frequency than that shown for
air flow. The lower trace shows the bulbar EEG with the slow wave removed by
filtering. The burst occurs with air inflow and not with inhalation, showing
that the burst depends on sensory input and not on a centrifugal pathway from
the brain-stem to the bulb. (From Freeman 1976.)
18.9. Non-linear dynamics of the
EEG
We turn now to the
EEG, noting that in the half century since the electronic amplifier first gave
easy access to this phenomenon, empirical exploration has done little to
resolve its baffling origins and complexities. We need theories expressed in
models to give us explicit hypotheses on what to took for and how to took. We
have used the modern computer to analyze our data with digital filters,
integral transforms, spectral displays, non-linear regression, and multivariate
statistics; we must also use it to express our hypotheses and predictions in
mathematical forms.
We restrict
consideration to the full KII set. We use the lumped KII set (Fig. 9) as the
kernel of a new model in which the linear dynamics of each component KO set is
approximated by a second order equation or equivalently by 2 first order
equations. We make two advances. First, we retain the non-linear wave-pulse
function to present the operation at the trigger zones of neurons in each
component KO subset, instead of replacing it by a straight line approximation.
Second, in recognition of the fact that each neural mass is distributed in some
part of the brain, we form an array of kernels (non-linear KII subsets) in the
form of a surface, and interconnect them by mutually excitatory and mutually
inhibitory synaptic lines as shown in Fig. 13. The input and output pathways
are likewise distributed but are locally determined in respect to KII subsets
as already defined for the lumped linear approximation. The equations are
summarized in Appendix C.

Fig. 13. The topology of connections
for the bulbar KII set is shown for the distributed case. Each component KII
subset has the same form as that in Fig. 10; it is replicated in
one-dimensional circular arrays with each element connected to every other by
mutually excitatory and mutually inhibitory lines (not shown in full) or as
two-dimensional arrays in a toroid (Freeman 1979c). The subscripted parameters
are forward gain coefficients having origin and termination on excitatory (e)
and/or inhibitory (1) neurons. An input line is designated 1. The superscripts
denote synaptic lines that are modifiable by learning.
There are no closed or
analytic solutions known to exist for the non-linear distributed KII set, nor
are any likely to be found. Solutions must be found by numerical integration.
For this purpose the model is expressed in an 8 X 8 array of 64 kernels, each
having 8 first order equations, so that the dynamics is described by 51.2
coupled first order ordinary equations instead of by partial or
integrodifferential equations. Owing to the use of this small number of kernels
in this discrete approximation, we must suppress instabilities due to edge
effects by using a toroidal boundary condition. In effect every kernel is
connected to every other in all directions over the surface. For simplicity,
propagational delays are omitted; interactions have no dependence on distance
over the surface of the array. Again for simplicity the initial conditions for
amplitudes and rates of change are all set to zero, and the synaptic strengths
(the kijs) are made spatially uniform. The
input is either a set of impulses given to selected input channels to simulate
low-level orthodromic or antidromic electrical stimulation, or (in the example
from the olfactory system) a surge designed to simulate receptor input to the
bulb during an inhalation.
In order that it be admissible,
the model must meet at least 3 criteria. The first is that it be stable over a
sufficiently wide range of input and of parameter settings to allow ERP and EEG
simulations. This aim is achieved by including several features, such as:
dynamic range compression at the input corresponding to an operation done by
the periglomerular interneurons in the outer bulbar layer (Freeman 1975, pp.
291-298, 1979b), the proper boundary condition, a degree of symmetry in the
strengths of mutual excitation and inhibition (kee and kii), and minimization of the spatial
divergence of negative feedback kei and Kle (diagonal
connections in Fig. 13 are unnecessary). The second criterion is that the model
replicate all of the known properties of ERPs in relation to input parameters,
behavioral manipulations, and drug effects. This is done by use of impulse
input, adjusting the synaptic and non-linear gain parameters, and measuring the
two kinds of output (waves and pulses) with the same procedures used to measure
ERPs and PSTHs. The third is that the model serves to generate the main
varieties of EEG wave-forms (Fig. 12). Examples of simulated bursts are shown
in Fig. 14 (Freeman 1979b,c, 1986, 1987).

Fig. 14. Various shapes of burst are
simulated with the non-linear KII set by using slightly different values for
the gain parameters. The right lower frame shows a limit cycle induced by
sustained simulated input (see also Gonzalez- Estrada and Freeman 1980). (From
Freeman 1979b.)
The class of coupled
non-linear oscillators to which the KII set belongs has certain properties that
are crucial for understanding the EEG. Each system has multiple stable states.
Each stable state is characterized by parameter values and a domain of input,
such that when the system is placed within the domain it will stay within that
domain unless and until it is forced out by a change of input or by a parameter
change. If then left to itself the system will settle into one of 3 types of
output: either it will go to rest and stay there, or it will go into regular
oscillation, or it will go into a restless aperiodic fluctuation in some limited
region of its output range. If further inputs are given within the designated
domain the system will settle back to its designated end state, manifesting
what is called an 'attractor.'
The 3 types are called
'equilibrium,' 'limit cycle,' and 'chaotic' or 'strange' attractor. The input
domain over which the attractor exerts its influence effectively is called its
'basin.' Transition from one basin to another is called a 'bifurcation'
(Hassard et al. 1981).
Examination of the KII
set shows that it has at least 4 equilibrium points. One is a rest state in
which the non-linear gain is set to zero. This corresponds to the open loop
state imposed by deep anesthesia. Another is a rest state that may be inferred
to exist in the conditions of steady state that are used for deriving ERPs and
PSTHs. (More will be said about this later.) The other two stable states occur
when the aforementioned stability conditions are violated, and the system goes
into steady maximal excitation or inhibition. These two states do not exist in
the bulb. Although they might represent departures into states leading to or
comprising seizures, the KII model is not sufficient to simulate epilepsy. By
using a different non-linear gain curve Babloyantz and Kaczmarek (1979) have
made some progress in doing so (Freeman 1986, 1987).
A near-sinusoidal limit
cycle attractor has been demonstrated by giving the model a step input (Fig.
14D). The amplitude, frequency and spatial patterns of phase and amplitude
depend on the input and parameter values. The oscillation decays to rest when
the step input is terminated. This type of limit cycle behavior has been
induced in the olfactory bulb and cortex by drugs and by hyperthermia (Freeman
1975, pp. 381-390). Recurrent, abortive limit cycle behavior is simulated by
phasic input corresponding to the level of receptor input to the bulb during
normal respiration (Figs. 12 and 14).
Chaotic activity is
generated by the model, but only when it is structurally changed. This is done
by forming a feedback connection in each kernel (diagonally between Mt and Gt
in Fig. 9 or e2
and i2 in Fig. 13). Then simulated bursts appear to have two or more frequency
components with unpredictable amplitudes and phases. Indeed in long stretches
the output often resembles the erratic fluctuations of the EEG at rest. Each
sequence is reproducible if re-started with the same input and parameters, but
small changes in the input or in a parameter lead to increasingly different and
divergent wave shapes, though always within certain bounds of frequency and
amplitude. Analysis of the KII model is incomplete since the conditions for
transition from chaos to limit cycle and back again have not been identified (short of the arbitrary and physiologically
meaningless insertion and deletion of connections). The KIII model is discussed
elsewhere (Freeman 1987).
A type of output that
is very similar to chaos has been generated by giving simulated low-level white
noise (random number sequences) as input to the model, when it is in the basin
of an equilibrium attractor. The amplitude is limited by the non-linear gain
curve, the spectral range is ordained by the bandpass characteristics of the
KII set, and the time series is unpredictable and unreproducible whether or not
the initial conditions are changed. The similarity poses the questions now to
be considered, whether the background EEG manifests an equilibrium attractor
under random perturbation or a chaotic attractor, and what criteria might be
used to tell the difference.
The distinction is
very important for understanding brain function. Chaos is a deterministic and
not a random or stochastic process (Helleman 1980; Garfinkel 1983). If the
initial conditions and the input that place a system in the basin of a chaotic
attractor are reproduced, the system will give the same output no matter how
random it might appear. If the input or initial conditions are changed (however
slightly), the output will differ increasingly over time and not converge to a
periodic or reproducible wave-form. Unlike the random variable in which large
deviations occur however rarely, the chaotic variable is bounded; its degrees
of freedom are relatively low, its trajectory circumscribed. It can arise from
a tendency to instability that is counteracted by a stabilizing influence. For
example, if a mutually excitatory population (KIi set) has a normalized gain greater than unity, it is
intrinsically unstable. If its output is delivered to inhibitory interneurons
with negative feedback in a KII set, the excitation is counteracted, and
restless perturbation results. If we can devise criteria to identify the basal
EEG of the bulb as chaotic, we can assign it to a deterministic mode of
function of the KII mass; otherwise we must identify sources of random activity
in or outside the bulb and demonstrate that they have the requisite properties
to drive the KII set in its background state. This problem is considered
further in Section 18.13 and Appendix D.
18.10. Spatial analysis of the
EEG
The main conclusion to
be drawn from non-linear analysis of the olfactory EEG is that the bulbar
mechanism is highly non-stationary. The bulb changes its state as it enters a
burst with each inhalation and again as it leaves the burst with each
exhalation. At a typical respiratory rate for rabbits of 3-5/sec the duration
of a given state may be on the order of 75-150 msec. No two successive bursts
are identical, nor should they be if there are continual changes in the odor
content of air inhaled by the animals. Herein lies a major difficulty in the
use of averaging techniques to the extent that they assume stationarity over
the time period of averaging. Yet, in order to make estimates of means,
variances and confidence intervals, some form of averaging is essential to the
measurement process. In this section we present a solution to this problem by
introducing the techniques of simultaneous recording of the EEG from multiple
electrodes that are placed on or in a single neural structure.
The problem can be
viewed in another way. Up to this point we have postulated that a recording is
made from a single electrode pair over a time period on the order of 10 sec,
which is sufficient to allow data collection for calculation of an ERP or an
autocovariance function and power spectrum of the EEG. These procedures give
access only to the stationary properties manifested by the dynamics on the
average over the whole period but not to the time-varying properties within the
period. If we chop the recording into segments on the order of 0. 1 sec in
duration, we may be hard-pressed to describe the EEG patterns in those segments
with any confidence. We cannot form ensemble time averages in the manner of
deriving ERPs, because the phases, frequencies and envelopes of the EEG burst activity
vary continually, and we have no time marker by which to set the start of each
segment. However, we can form an ensemble time average by recording an EEG
segment simultaneously from 60-64 electrodes monopolarly with respect to a
distant electrode. We call this ensemble average an AEEG; it serves the same
purpose for the nucleus of measurement as does the AERP (Section 18.4) for
measuring ERPs.
The technique requires
that the electrodes be placed on or in a contiguous area of cortex or nucleus.
We will first consider the data and then undertake their measurement. An
example in Fig. 15 shows 60 unaveraged traces 100 msec in duration of an EEG
burst from a 6 X 10 array of electrodes 0.8 mm apart (a 4 mm. x 7 mm 'window'
onto the lateral surface of the olfactory cortex of a rabbit). Each trace is
amplified 10K with high and low pass filters at 10 Hz and 300 Hz. The same
wave-form appears on all channels with equal numbers of peaks and zero
crossings, though with local variations in the envelope of the oscillation, in
peak amplitude, and in phase. The commonality holds in spectral analysis, as
shown in Fig. 16 by comparing the spectrum of the ensemble average with the
average of the 64 spectra from an 8 X 8 array, and it holds also for background
segments between bursts both in displays of time series and spectra. It is
confirmed by examination of the distributions of the 2016 product moment
correlation coefficients between pairs of the 64 traces, and of the 64
coefficients between each trace and the ensemble average of the burst. For
example, the grand mean (by z-transform) of the correlation coefficient from 60
bursts by each of 6 rabbits is 0.82.

Fig. 15. Unaveraged EEG recordings are shown of a single burst (100 msec) recorded from a 6 X 10 array of electrodes placed over the olfactory cortex. The commonality of wave-form is apparent over the total window of 4 mm X 7 mm, though there are differences in amplitude and in phase with respect to the ensemble average (AEEG). The amplitude scale is in microvolts. (From Freeman 1978a.)

Fig. 16. The spectrum of the
ensemble average (AEEG) of the set of 64 traces recorded from an 8 x 8 array is
compared with the average spectrum of the 64 spectra by the FFT. The two curves
are in close conformance both in a burst (above) and in an interburst period
(below). This reflects the high degree of coherence of the bulbar EEG
spatially, whether or not a burst is present. (From Freeman and Viana Di Prisco
1986b.)
We describe each burst
as a 'carrier wave' at a certain frequency (in rabbits averaging 68.2
±12.1 Hz) with spatial modulation of amplitude and phase. We determine
the amplitude from the root mean square (rms) of each trace, and the phase by
correlating each trace with the ensemble average at 5 time lags, fitting a
parabola to the 5 values, calculating the time lag of the extremum, and
dividing that lag by the cycle duration at the peak frequency from the Fast
Fourier Transform (FFT). Amplitude and phase patterns are displayed in density
or contour plots (Fig. 17) either individually or as the ensemble average and
standard deviation of sets from 10-20 bursts. The latter show that each animal
generates its own characteristic spatial patterns of amplitude and phase.
Successive bursts vary unpredictably in shape. No two are identical, yet each
is readily identified as characteristic of the pattern of a given animal. The
ensemble averages of the spatial patterns of interburst segments correspond
closely to those of bursts, but the standard deviations are larger.

Fig. 17. Contour plots are shown in
perspective for the root mean square (rms) amplitude of a burst recorded over
the anterior olfactory nucleus of a cat, and (below) for the phase pattern
measured with respect to the phase of the AEEG. In this case the phase gradient
(lead to lag from left to right) reflects the conduction velocity of the
underlying lateral olfactory tract. Similar gradients are found in bulbar EEG
foci but at lower phase velocities; they have not been found to vary
consistently in relation to behavior, and they do not conform to PON velocity
or direction (Freeman and Baird 1986). (From Freeman 1978.)
We have devised or
adapted statistical procedures based on chi-square and t tests to measure the
pattern variability and to assess the significance of pattern differences
relating to training animals to respond to odors presented as conditional
stimuli; these are described and discussed in a different context (Freeman and
Schneider 1982; Viana Di Prisco and Freeman 1985; Grajski et al. 1987).
We undertake
decomposition and precise measurement of the multiple EEG segments by
curve-fitting in much the same way as for ERPs. There being no analytic
solutions known for the full KII set, we choose the cosine as the basis
function. One of several variants of the procedure is as follows. For each
burst we calculate the ensemble average (an AEEG) and its power spectrum to
estimate the peak frequency and its phase, fit a cosine by non-linear regression
to optimize the phase and frequency values, and subtract the fitted curve from
the average. We repeat the procedure 4 times, and then fit the sum of 5 cosines
at the optimized frequencies and phases to each of the 64 traces in order to
determine the 5 amplitudes at each channel by linear regression. The result is
a 5 X 64 matrix of amplitude values at 5 frequencies, which incorporate over
80% of the burst energy on the average. The graph in Fig. 18 shows the
proportion of bursts for which the 5 components cumulatively account for a
specified fraction of the energy. There is striking variability in the extent
to which energy is compressed into one narrow frequency band.

Fig. 18. The results are shown of measurement by decomposition using cosine basis functions at 5 frequencies on 900 bursts without odor stimulation (control) and on 450 bursts with odor stimulation under reinforcement (CS+). The abscissa shows the fraction of total energy incorporated cumulatively by the 5 components. The ordinate shows the percentage of bursts that have at least the designated fraction of energy. For example, roughly 50% of bursts have at least 0.50 of their energy in the dominant component, but in 10% it is less than 0.25, and in only 10% is it greater than 0.90. On the average about 0.20 of the energy is spatially uncorrelated and is removed by filtering. This fraction increases to about 0.30 in odor bursts (see Figs. 23 and 24). (From Freeman and Viana Di Prisco 1986a.)
To be sure, these
components do not imply the existence in the bulb of independent oscillators or
harmonics. The variations of their frequencies from burst to burst, the
irrational ratios of their frequencies, and their frequency modulation within
bursts all argue against this. The aim here, as before, is to incorporate as
much as possible of the variance of the wave-forms in order to determine where
the correlated variance lies and how its measurement is to be optimized. Here
again there is a dominant component; the remaining 4 components are usually sufficiently
small that they can be regarded as clutter. Again, the precise measurement of
the desired component requires us to design an adaptive filter for the clutter.
With this aim in mind we modify the cosine for the dominant component by
introducing terms for its amplitude and frequency modulation into that equation
![]()
where AM and FM are coefficients
providing for linear modulation over time respectively in the amplitude and
frequency of the dominant component about its mean amplitude and frequency at
the midpoint of the burst tm.

Fig. 19. Examples are
shown of AEEGs of 3 bursts recorded during a control period (C) and during
presentation of an odor (TI and T2). At the left are the time series and at the
right are the spectra by the FFT. The dots show the digital values. The curves
at left show the dominant component that has both amplitude and frequency
modulation (treated as linear over time). The faint curves in the right frames
show the spectra of this component. The dark curves show the spectra of the
residuals after subtraction of the dominant component. This is the clutter plus
noise, which is fitted with 4 additional cosines. The reason for devising an
adaptive filter for the clutter is to measure optimally the amplitude of the
dominant component. (From Freeman and Viana Di Prisco 1986b.)
Fig. 19 shows examples
for 3 bursts of the ensemble average (AEEG), their spectra, the fitted curves
of the dominant components, and the clutter. The tendency for the energy of the
clutter to form spectral clumps justifies the use of cosine basis functions.
The 5 cosines routinely incorporate over 99% of the energy in the ensemble
average. Occasionally the sum of energy of the components exceeds 100% and
rarely 150%, showing that the procedure may recover energy that is otherwise
lost to observation owing to interference, or else that the linear
decomposition injects structure into the data that does not belong there.
Finally, when the components are identified at specific frequencies, we can
make corrections for the amplitude and phase distortions imposed by the filters
that are used on the time series prior to analysis. An example in Fig. 20 shows
the spatial patterns of the 5 components in the form of density plots for 3
subgroups of bursts from the olfactory bulb of a rabbit.

Fig. 20. Density plots are shown for
the ensemble averages of components over 60 control, 30 CS+, and 30 CS- bursts
from a rabbit. The mean frequency for each set of components is shown above the
frames. Below each frame is shown the average fraction as percentage of total
energy for the components. (From Freeman and Viana Di Prisco 1986b.)
Measurement of EEGs by
decomposition opens the way to spatial pattern analysis, which should be
distinguished from use of multi-electrode recording with widely spaced scalp or
depth placements to sample from different brain structures simultaneously (Ch.
12). For example, if we have 30 electrodes we may place them all in one
cortical area, such as a part of the olfactory bulb, in order to 'digitize' the
spatial configuration of monopolarly recorded potential in that part. Or we may
place 2 electrodes in each of 15 cortical areas (the bulb, anterior nucleus,
prepyriform, amygdala, hippocampus, etc.) in order to correlate the bipolarly
recorded time series from multiple spatially distinct structures. The latter is
not spatial analysis, because it does not allow the determination of potential
as a function of distance. The aim of spatial analysis is to test the
hypothesis that within- structure EEG spatial patterns (as distinct from
between en- structure correlation patterns) may correlate with behaviorally
significant aspects of stimuli, responses, or brain states and operations.
However, before we consider such correlations we must deal with the problem of
the design and use of spatial filters.
18.11. Spatial spectral analysis,
filtering, and deconvolution
The overwhelming advantage that EEG
decomposition offers us lies in the solutions it opens up to one of the most
vexing problems in EEG work. The electric currents generated by neurons singly
or in sets spread outwardly in all directions, often (depending on neuron
geometry) to distances greatly exceeding the size of the neurons. This is the
biophysical basis for the scalp EEG. Even in proximity to the generating
neurons the fine spatial structures of the fields of potential are blurred or
smoothed. Worse still, the extracellular compartment in the brain is the common
return path for currents from all neurons, and their contributions to potential
fields overlap 'and sum in ways related to their geometries and not to their
functions. This is known as the 'cocktail party' effect. Solutions to the
problems of current spread and intermingling lie in the proper design of
spatial filters. It is unnecessary to apply such filters to raw digitized EEGs,
because it can easily be done to each of the five 8 X 8 matrices of amplitude
values of the components or of the complex gains at peak frequencies from the
FFT, which already incorporate most of the variance.
The first datum needed
for this work is the interelectrode distance for a regularly spaced array. It
is equivalent to the choice of the time interval used for digitizing a time
series: if the spectrum of the signal is unknown at the outset, the interval must
be made arbitrarily small in order to avoid aliasing from unsuspected high
frequency spectral peaks. A useful device is a linear array of electrodes, say
1 X 64, that can be placed across an area of cortex. For small structures such
as the olfactory bulb we use a circular array. Fig. 21 (upper frame) shows the
64 rms amplitudes (dots) of a burst recorded from the bulb of a rabbit with an
array 4 mm in diameter and an interelectrode interval of 0.2 mm. This is a
typical cross-section of the potential of an EEG focus on the bulb.

Fig. 21. Upper frame: the first step
in spatial analysis is to determine the proper interelectrode distance that is
equivalent to the digitizing interval in time series analysis. For this
determination the interval must be arbitrarily small; a I X 64 linear or
curvilinear array best serves this purpose. For this example the array is
circular with an interval of 0.2 mm over a circumference of 12.6 mm. The dots
show the rms amplitudes of a typical burst digitized at 2 msec intervals over a
duration of 100 msec. The curve is a 1-D Gaussian density function fitted to
the data by non-linear regression and scaled from zero to the point of maximal
rms amplitude placed at the origin of the spatial dimension. Lower frame: the
potential distribution in the upper frame is simulated by means of a core
conductor model of the granule cells in the olfactory bulb (Rall and Shepherd
1968). The distribution of activity density in an active population is
represented by a bivariate Gaussian function (inset solid curve) with its
origin 0.58 mm beneath the point of origin at the surface on the circular
electrode array; the dotted curve shows the fall-off in activity density under
the circular segment of the array. The dipole moment density of the granule
cell generator is shown to scale beneath the abscissa as if beneath the bulbar
surface at a mean depth of 0.58 mm, with discrete approximation by dipoles 0.2
mm apart, and with dipole point separation of 0.17 mm (Freeman 1975). The solid
curve is the predicted profile of potential at the surface for an activity
density with standard deviation of 1.0 mm. The dots show the effect on rms
amplitude of adding 'noise' (random numbers independently for each channel).
Each simulated burst is a set of 64 time series 100 msec in length with noise
superimposed on a sinusoidal curve with signal to noise ratio of 4: 1. The
smooth curve represents noise-free amplitude and is scaled to the maximal
simulated array amplitude. (From Freeman and Baird 1986.)
The procedure used is
to first apply the FFT to the AEEG in order to find the peak temporal frequency
of a burst; second to determine the real and imaginary parts of the complex
gain at that frequency for each of the 64 traces; third to apply the spatial
FFT separately to the real and imaginary parts; fourth to combine the results
in the spatial frequency domain; and fifth to normalize to unit power at 0 c/mm
and take the natural logarithm. Results such as that in Fig. 22 show that the
spatial spectrum is essentially flat for the rabbit above 0.4-0.8 c/mm and for
the cat above 1.0 c/mm (Freeman 1978, 1980). Were we digitizing a time series
with its highest frequency at 1.0 c/sec, we would require a digitizing interval
<0.5 sec corresponding to one-half cycle duration to avoid aliasing;
correspondingly we require an interelectrode distance no greater than 0.5 mm.
For an 8 X 8 array this provides for a 3.5 mm X 3.5 mm 'window' that neatly
fits surgically onto the lateral aspect of the bulb. Contrary to intuition,
spatial resolution depends not on the size of the individual electrode face but
on the interelectrode distance. In order to minimize electrode noise the
surface area of each electrode should be as large as possible. We have found
that a stainless steel wire diameter of 0.25 mm is satisfactory (Eastman 1975).
Further description is devoted to analysis of EEGs from these now standard
arrays.

Fig. 22. Upper frame: the 1-D FFT is
applied to the complex gain at the peak frequency of 20 bursts, and the means
and standard errors (S.E.s) are plotted for normalized natural logarithm of
power as a function of spatial frequency. For this subject the spatial
frequency is asymptotic to a noise level above a spatial frequency of 0.4 c/mm.
Lower frame: the 1-D FFT is applied to the complex gain of the simulated bursts
in the same manner as for the EEG. The width of the focus is fixed at 1.0 mm;
the 4 curves (2 of which are reproduced in the upper frames) result from
shifting the origin of the granule cell Gaussian density function (Fig. 21) to
points at the indicated distances from the circumference of the array along a
radius of the array. A similar family is obtained by changing the width of the
focus. The linear or circular array is useful for detecting high spatial
frequencies (if any) with a limited member of electrodes, but it cannot be used
to localize EEG foci or to measure their widths. (From Freeman and Baird 1986.)
The two-dimensional
Fast Fourier Transform (2-D FFT) is applied to each 8 X 8 matrix after it is
embedded in a 32 X 32 matrix of zeroes, multiplied by a Hamming window, and
translated to bring the low spatial frequencies to the center of the output
plane (Gonzalez and Wintz 1977). No significant departures from radial symmetry
have been found in the two -dimensional spectra, so the output is radially
integrated, divided by the power at 0 c/mm, and converted to the natural
logarithm to give log normalized power as a function of spatial frequency in
c/mm. If the phase pattern of the component is to be included as well, then we
subject each of the 64 traces of EEG data to the 1-D FFT, calculate the real
and imaginary parts of the complex amplitude at the desired temporal peak
frequency, apply the spatial transform to the matrices of both parts, and sum
the spatial spectral parts prior to derivation of the power spectrum,
normalization, and logarithmic conversion.
Fig. 23 shows the
characteristic shape of the spatial spectrum of the bulbar EEG in the form of
the ensemble average and standard error over sets of 20 bursts from 6 rabbits.
The energy decreases monotonically from near 0 c/mm with increasing spatial
frequency to a plateau above 1 c/mm. The inflection occurs between 0.5 and 0.8
c/mm. A small peak commonly appears near I c/mm; this is an artifact due to the
regular spacing of electrodes near 0.5 mm in the array. There is no other
evidence for spatial periodicity. The rate of fall-off over the low spatial
frequency range is determined by the size of an active EEG focus: a broad focus
gives rapid fall-off, while a narrow or multiply peaked focus gives less rapid
fall-off. This segment of the spatial spectrum invariably shows an upward
convexity. This configuration proves that the energy of activity is indeed
concentrated in the focus, as suggested by inspection of the EEG and of contour
plots (Figs. 15 and 17). That is, the burst focus does not result from local
synchronization of on-going activity with some spatially uniform temporal
amplitude but with previously dispersed frequency and phase. Were that the
case, this segment would conform to a straight line (Katznelson 1982). The
burst and interburst segments do not manifest respectively 'synchronization'
and 'desynchronization' in classical EEG parlance. This conclusion is confirmed
by concomitant unit and EEG recording in the bulb. The mean rates of firing of
single and multiple units wax and wane with respiration in concert with the
amplitude of EEG burst activity; and spatially the local mean firing rate is
proportional to the local EEG amplitude. The burst is a manifestation of
augmented metabolic energy release, not of augmented coherence at a fixed
energy level in local regions of activity comprising foci.

Fig. 23. The spatial spectrum of the
EEG from an 8 X 8 array of electrodes on the bulb of a rabbit is shown as the
normalized natural logarithm of power versus spatial frequency in c/mm. The
mean and standard error are pooled for 20 bursts from each of 6 rabbits. The
open dots show the spectrum of a uniform rectangular pattern subjected to the
Hamming procedure; this defines the upper limit on spatial analysis that is
imposed by the size of the array window. The 4 curves show the spectra
predicted for pools of granule cells with activity density functions in the
shape of a bivariate Gaussian distribution having standard deviation W in mm.
The lower limit for this model is shown by the curve for width W = 0. (From
Freeman and Baird 1986.)
In order to understand
and explain the form of these spectra we construct spectra from a volume
conductor model of the bulbar mechanism (Freeman 1975, pp. 212-228, 1978), with
output that simulates the convex low-frequency segment of the EEG spatial
spectrum. Given a pattern of potential field on the surface of a volume
conductor, there is an infinity of possible source-sink distributions
compatible with it (Nuñez 1981; Katznelson 1982; Ch. 13 and 14). If
recordings are made at selected points throughout the volume, and if close
studies are made of the cytoarchitecture and physiology of the neurons in the
central region of the potential field, the possibilities become severely
restricted. The approach used is to postulate a set of sources and sinks that
is consistent with depth recordings and the properties of a putative neural
generator, to calculate the surface potential at locations corresponding to the
geometry of the recording array, and to adjust the parameters of the sources
and sinks until the calculated potential optimally conforms to the observed
potential. We use the electrostatic equivalent as our approach for the bulb
(Freeman 1975, pp. 172-185), in which each local source or sink is represented
by an equivalent point charge. This differs from the electric field approach as
used by Rall and Shepherd (1968) for the bulb. The results are the same, but
the scalar computation of the potential from Coulomb's law is much simpler than
constructing a current network.
We postulate that the
granule cells sustain the EMFs of the currents that underlie the dominant EEG
oscillations, which are added with currents contributed by other cells to the
raw EEG. The granule cell sources and sinks constitute a distributed current
dipole in a plane parallel to the bulbar surface at an average depth of
approximately 0.58 mm with point separation of ±0.17 mm (Fig. 21, lower
frame). We represent the regional distribution of the dipole moment density
under the surface with a bivariate Gaussian density function of standard
deviation W. The potential function at the surface is bell-shaped; the width of
the bell varies in near-proportion to the value of W. The rate of fall-off in
spectral energy with spatial frequency varies inversely with width, and
therefore with W. When W = 0, the width of the bell is minimal (for a dipole
depth of 0.58 mm the half-amplitude radius at the surface is about 0.5 mm); we
call this limiting case the 'point spread function' of the granule cell surface
potential. Its spectrum defines one extreme for the rate of fall-off that can
be expected in observing granule cell activity (Fig. 23, W = 0). The other
extreme is defined by the Hamming window applied to a square with the
designated size of the electrode array (the dotted curve in Fig. 23). Observed
spectra lie between these limits with predicted radii between W = 1.0 and W =
1.5 mm. We confirm these values by measuring the widths of the corresponding
EEG foci in the spatial coordinates.
The energy manifested
in the plateau at higher spatial frequencies cannot be attributed to granule
cells and should be removed irrespective of its various sources. We do this by
using a low-pass exponential filter (Gonzalez and Wintz 1977) as shown in Fig.
24. The matrix of 64 amplitudes of a component from a burst is transformed by
the 2-D FFT without Hamming; the filter is applied to the two-dimensional image
in the. spatial frequency domain to attenuate the energy at high frequencies;
the inverse 2-D FFT carries the filtered image back to the spatial domain. We
estimate that this procedure removes 15-25% of the energy in bursts, and up to
40% in interburst segments, when the cut-off frequency of the filter is 0. 5
c/mm.

Fig. 24. The performance
characteristics are shown for the exponential spatial low-pass frequency filter
applied to spatial spectra as normalized logarithm of power derived by the 2-D
FFT without Hamming. A(f) = exp [ln(2-0.5) (f/fo)n], where f is frequency in c/mm. The cut-off at fo is the 3 dB fall-off point. From the results exemplified in
Fig. 23 the cut-off has usually been set at f0 =
0.5 c/mm and n = 4 (see also Fig. 29). For high pass filters n = -2. (From
Freeman and Baird 1986.)
The final step is to
apply spatial deconvolution in order to correct the image for the distortion
caused by volume conduction (Freeman 1980). We approximate the bulbar generator
by an array of 64 elements, one underlying each electrode. We represent the
activity of each generator by the variable u(t) and the overlying potential by
v(t). Then each potential is the sum of contributions from all 64 generators.
![]()
where the aij are
coupling coefficients determined by the point spread function and the distance
between each pair of electrodes. In matrix notation at each time t, or for each
component over t,
![]()
Therefore
![]()
We multiply the 64 X 1 column vector
V of amplitude values by the inverse of the 64 X 64 matrix A to recover an
estimate of U, the granule cell activity density function. The procedure is
repeated for each desired component in each burst of interest.
The procedure acts like
a high pass filter; it accentuates contributions from current sources
superficial to the granule cell generator (Martinez and Freeman 1984) that have
narrower point spread functions, and also the electrode noise for which this
function has zero width. Thus, low pass filtering must precede deconvolution.
The activity from more distant current sources is dis-accentuated, and activity
at the monopolar electrode that appears spatially uniform in amplitude is
relegated to an edge effect.
The operation of deconvolution
is in principle related to the process of focusing a blurred image taken at
improper focal depth. For this reason we call the inverted matrix, which is a
type of Laplacian operator, a 'software lens.' The optimal focal depth is
predicted from the anatomical depth of the generator for an experimental
evaluation (see Section 18.12, Fig. 29).
This set of techniques
should find use in scalp recording of EEGs (Ch. 3 and 13). First, curvilinear
or rectangular arrays of 64 electrodes at regular spacings (e.g., 1.0 cm, 7 cm
X 7 cm) and the 2-D FFT at selected times (or of selected components measured
by curve-fitting) will give the spatial spectrum that serves to specify the
spacing and window size that is appropriate for different experiments. Second,
spatial filtering may serve to minimize EMG potentials. For this purpose it
will be desirable to determine their point spread functions, propagational
patterns, and spatial spectra, so that appropriate spatial filters can be
designed to separate them from the EEG. A low pass filter would suffice only to
the extent that the EMGs could be shown to have narrow point spread functions
owing to the locations of their generators just under the scalp. Spatial
averages should be taken along directions parallel to the muscle fibers. Third,
the contributions to 'monopolar' recordings from sources affecting the
reference but not the array electrodes (whether from ECG, EEG, EMG, or eye
movements), may be attenuated for the inner 6 X 6 or 4 X 4 subset of the 8 X 8
array of electrodes by use of spatial deconvolution of some alternative
Laplacian operator, depending on the spatial properties of the generator of the
desired components of the EEG.
18.12. Optimization of
measurement; the behavioral touchstone
The procedures described
in the last two sections can give access to the detailed spatial patterns of
the EEG of defined neural populations in local regions of brain tissue.
However, this is new and largely unexplored terrain. We have no clear bases on
which to form expectations of what the patterns ought to look like, no
equations to solve to provide archetypal shapes, and no analytic spatial basis
functions to fit to the data (other than the journeyman bivariate gaussian). We
can print out large numbers of these patterns as contour or density plots
(e.g., Figs. 17 and 20) and tape them to the walls of our laboratories for
inspection, but they quickly exhaust even the remarkable powers of the human
visual system for detecting regularities of form. Our task now is to discuss
procedures for condensing these vast quantities of data, for seeking
regularities in them, and for assessing the significance of differences between
subgroups of samples of EEG spatial patterns. The current availability of large
arrays of electrodes and of pre-amplifiers, and the recent introduction of
optical techniques for observing color changes in voltage-dependent dyes
applied to neural tissues indicate that this task will be approached by
increasing numbers of investigators in the near future. At present the only
body of local EEG data (as distinct from scalp EEG data) that is sufficiently
large to support analysis is that from the olfactory system of the rabbit.
Therefore, this section consists largely of an example of spatial analysis for
the rabbit olfactory bulb. Here we follow, and thereby illustrate, the outline
laid down in the first several sections of this chapter.
We choose our basic
model or hypothesis (Section 18.1) on the premise that the olfactory bulb is
involved in the neural mechanism for olfactory discrimination. The receptors
form a two-dimensional array in the nose, and their axons project to the bulb
with a degree of topographic order in the primary olfactory nerve. Each
receptor responds selectively to some odors and not to others. We assume that
each stimulation by an odor during an inhalation causes a unique spatial
pattern of receptor activity for that odor and inhalation, resulting in another
unique pattern of excitation onto the bulbar surface. If an animal is able
behaviorally to discriminate the odor, we infer that a spatiotemporal pattern
of activity representing that odor must exist in the bulb and be transmitted to
the prepyriform cortex as the basis for discrimination, whether or not the
discriminatory process is brought to completion in the bulb. Further, there
must be a different neural activity pattern for each discriminable odor, and
some attribute of each pattern must be invariant over every occurrence in which
correct discrimination of its odor takes place. Our hypothesis is that these
activity patterns are manifested in some aspects of the bulbar EEG. We predict
that when the EEG bursts have been properly measured, the numbers will be found
to contain odor-specific information.
This hypothesis is
also applicable to studies of primary sensory and motor neocortex. It is
obviously more problematic in other areas, suggesting that the search for basic
EEG mechanisms might best be focused at present onto the main sites of entry
and exit of the forebrain (Ch. 17 and 19).
The key requirement
for testing this hypothesis is a database (Section 18.2) that is recorded from
the brain during performance of odor discrimination. We know that each animal
generates its own generic spatial pattern of bulbar EEG activity, and that this
pattern changes to a new form whenever the animal is trained to respond to a
test odor (Freeman and Schneider 1982; Viana Di Prisco and Freeman 1985; Gray
et al. 1986). We infer that odor-specific information may be manifested in the
EEG only after the completion of training.
We condition thirsty
rabbits to respond with licking (with or without sniffing) to one odor CS+ by
presenting it paired with delivery of water, and to respond with sniffing and
not licking to a second odor CS- by presenting it on randomly interspersed
trials without water. Four sets each of 90 bursts accumulate over 3 sessions:
odor bursts CS+ and CS-, and control bursts C+ and C- taken just prior to
stimulation on each trial. The aim of analysis is the development of techniques
that optimally separate bursts CS+ and CS- into tight clusters distinct from
each other and from clusters of bursts C+ and C-, but that do not segregate the
control bursts C+ from C-. We restrict consideration to those trials in which
'correct' responses occur, and to the 4 of the 5 rabbits that learn the task.
Because we lack
analytic basis functions (Section 18.3), we find the rms amplitude for the EEG
trace on each channel, and treat each burst as a 1 X 64 vector. In order to
obtain an overview on large sets of bursts (e.g., 120) we use the non-linear
mapping algorithm of Sammon (1969), which maps each 64-dimensional burst
pattern into a point in the two dimensions that optimally represent the degrees
of similarity among a set of bursts by the Euclidean distances between their
points. Examples are shown in Fig. 25. The upper frame shows the points for 60
control bursts from two rabbits. The subject differences are reflected by the
two clusters, and the background variation is reflected by the scatter in each
cluster. The lower frame shows the scatter of 120 control bursts from a rabbit
with a bimodal spatial rms EEG pattern. That is, there are two maxima of EEG
burst amplitude P1
and P2 separated within the array window by
about 2 trim, and the dominance of one over the other varies randomly on
sequential bursts. These are labeled by open and solid dots; the bursts with
highest and lowest mean rms amplitude are labeled respectively by (+) and (-).

Fig. 25. Upper frame: the results
are shown of applying the non-linear mapping algorithm of Sammon (1969) to 60
control bursts from 2 rabbits, showing that the differences between subjects
are easily detected by this procedure, and that the cluster for each subject is
unimodal. Each burst is first expressed as a 1 X 64 vector of channel rms
amplitudes after bandpass filtering (10 and 150 Hz) and then as a point in 2
selected dimensions for display of the degree of similarity to other bursts by
a Euclidean distance between points. Lower frame: a set of 120 control bursts
from another subject likewise reveals a unimodal distribution; see text for the
meaning of the plotting symbols. (From Freeman and Baird 1986.)
Each of these features makes some
contribution to the discrimination among bursts. The outstanding result is that
the distributions of control bursts (and of odor bursts as well) are unimodal
with a density that tends toward the gaussian. Then each cluster can be
described by a centroid and a pooled standard error (S.E.) in the two
dimensions (Ch. 16 and 17). We apply cluster analysis to sets of bursts
including both the controls (C+ and C-) and the test odor bursts (CS+ and CS-),
finding (Fig. 26) that the odor bursts differ in rms spatial pattern from the
control bursts but not from each other. The standard errors (S.E.s) of the odor
burst clusters exceed the distances between their two centroids. Moreover, the
S.E.s of odor clusters exceed the S.E.s of the control clusters (Viana DI
Prisco and Freeman 1985).

Fig. 26. The results are shown of
applying the non-linear mapping algorithm to a set of 120 bursts from the
olfactory bulb of a trained rabbit, Each burst is expressed as a set of 64 rms
amplitudes after bandpass filtering the time series (10-150 Hz). The means and
standard errors (S.E.s) are shown for the two sets of odor bursts (CS+ and CS-)
and for the preceding control bursts (C+ and C-) on trials in which correct
behavioral responses occurred. Each cluster is approximately bivariate
gaussian. The t test using the pooled variance for each pair of clusters
indicates that the centroids CS+ and CS differ significantly (P < 0.01) from
the centroids C+ and C- but not from each other. Therefore the channel rms
amplitude of bursts does not serve as an adequate descriptor for purposes of
detecting, odor-specific information (cf., Fig. 30). (From Viana DI Prisco and
Freeman 1985.)
The critical problem
before us is to find methods for data analysis that separate the two centroids
CS+ and CS- while not separating those for C+ and C- (Ch. 17). The most direct
method is to calculate the centroid for each subset of bursts in 64-space (the
means of the 64 channels over each control and odor subset after normalization
by channel over the entire set), and to express each burst by its Euclidean
distance from each of two centroids: C+ and C- for control bursts, and CS+ and
CS- for odor bursts. The degree of clustering is expressed by the segregation
of the points representing bursts as being closer either to its own centroid
('correct') or to an apposing centroid ('incorrect'), that is, to either side
of the diagonal in Fig. 27. The effectiveness of a given analysis is expressed
by the % correct classification of the odor bursts of both types less the %
correct classification of the control bursts of both control groups. This
percentage difference is our 'behavioral touchstone' for methodological
optimization and evaluation (Section 18.6).

Fig. 27. The centroids of 64-space
are found for the dominant components of 4 groups of bursts: C+, C-, CS+ and
CS-. The Euclidean distances for each control burst are found from C-
(ordinate) and C+ (abscissa, upper frame), and the Euclidean distances for each
test burst are found from CS+ and CS- (lower frame). The effectiveness of burst
separation by this algorithm is expressed by the percentage of bursts that lie
closer to their own (i.e., 'correct') centroid than to the other. The
behavioral touchstone is given by the difference between % 'correct' for odor bursts (86%) minus
the % 'correct' for the control bursts (55%), in this example 31%. The bursts
having peak frequencies f1 < 55 Hz are omitted. The smaller
spread of points for control burst reflects the characteristic tendency of
bulbar EEG amplitude to decrease when an odor is presented to an animal. (From
Freeman and Viana Di Prisco 1986.)
As predicted by the result 18 in
Fig. 26 the description of bursts by their rms values does not segregate the
two types of odor bursts significantly; the variance within the two clusters is
too great. We use curve-fitting (Section 18.4) by the methods in Section 18.10,
and spatial filtering and deconvolution (Section 18.11). Analysis of the
amplitudes of the dominant components gives some reduction in the variance, but
it is still insufficient to separate the odor bursts. The crucial step emerges
from temporal spectral analysis (Section18.5). We find that the frequencies of
the dominant components are broadly distributed across the range from 10 to 125
Hz with concentration in the range from 60 to 70 Hz, but there are substantial
numbers of bursts with dominant frequencies between 20 and 60 Hz (Fig. 28,
upper frame). The frequency modulation parameter FM in Eq. 17 of Section 18.10
on the average is negative (slowing of frequency during a burst) for
frequencies greater than 60 Hz as predicted by the describing functions in Fig.
10, but on the average it is positive (increasing within-burst frequency) for
frequencies lower than 60 Hz (Fig. 28, lower frame). Moreover, the variance of
FM across bursts increases exponentially with decreasing mean burst frequency.
These low frequency bursts are not accounted for or explained by the KII model
as presently constituted (Section 18.9 and Appendix C). We postulate that these
lower frequency bursts constitute a distinct class, that their irregularity in
the temporal domain may be accompanied by large pattern variability in the
spatial domain, and that they should be removed from the cluster analysis.

Fig. 28. Upper frame: the
distribution is shown by the bars for the frequencies of the dominant
components from 4 rabbits on trials in which a correct behavioral response
occurred. The mean and S.D. are shown for each subgroup of the fraction of
total burst energy incorporated into the dominant component. By this measure
the coherence of bursts is greatest in the frequency of range of 50-80 Hz. The
bursts with frequencies f1 < 55 Hz during odor presentation
outnumber those during control periods by 4 to 1. Lower frame: the frequency
parameter FM in Eq. 1 of Section 18.10 is expressed as the % modulation of the
mean frequency. A negative value means that frequency is slowing down within
the burst, which is predicted during burst onset by Fig. 10; a positive value
means that frequency is augmenting as during burst termination. A small part
(<5%) of the variation in FM expressed here as the standard deviation about
the mean (dots) may be attributed to sampling of bursts during editing. The large
variance in FM at lower mean frequencies is attributed to chaos (Section
18.13). (From Freeman and Viana Di Prisco 1986.)
Fig. 29 (upper left) shows the
effect on the behavioral touchstone derived from the analysis of dominant
components of deleting bursts having frequencies lower than the value indicated
on the abscissa. The optimal separation of bursts occurs with the cut-off at 55
Hz. An example of the Euclidean distances from one subject is shown in Fig. 27.
The results of non-linear mapping applied to the reduced set of dominant
components is shown in Fig. 30. The reduction of S.E.s for clusters of odor
bursts suffices to show clear separation of their centroids. Comparison with
Fig. 26 shows that the detection of odor-specific information in sets of higher
frequency bursts is obscured by the large spatial variance contributed by the
lower frequency bursts, when the latter are included in the analysis.

Fig. 29. Four examples are shown of
use of the 'behavioral touchstone' for methodological optimization. Upper left:
the stippled bars show the % difference (Fig. 27) as bursts with peak
frequencies less than the indicated frequency are deleted from the cluster
analysis. The peak occurs because the separation of odor bursts is high with
the cut-off at 55 Hz, but equally important, the separation of control bursts
is at a minimum. This is 'correct' for the control bursts, because the control
period is the same preceding presentation of both CS+ and CS- odors (see also
the legend for Fig. 30). The proportion remaining after deletion is shown by
the open bars. This result supports the criterion of peak frequency f1 < 55 Hz to identify bursts as chaotic. Also deleted are
bursts with -50% < FM < +50% and bursts for which the fraction of burst
energy in the dominant component is less than 0. 15, comprising together about
10% of bursts. (From Freeman and Grajski 1986.) Lower left: the % difference is
used to evaluate the effects of n-th order exponential spatial filters on the
EEG as in Fig. 24 (Gonzalez and Wintz 1977). The upper curve shows that maximal
separation of odor bursts occurs with a 4th order low-pass filter cut-off
frequency (down 3 dB at 0.5 c/mm), as predicted by spatial spectral analysis of
the bulbar EEG. The lower curve shows that minimal separation occurs with a 2nd
order high-pass filter set at 0. 17 c/mm, as predicted by the average of
measurements of the widths of active EEG foci, which is close to the passband
predicted by the width of the electrode array. The order parameter (N) is
optimized in the same way. These results prove that the odor-specific
information exists in the spatial passband that is characteristic of the bulbar
granule cell EEG generator (Freeman 1975, Ch. 4, 1978, 1980). (From Freeman and
Baird 1986.) Upper right: the % difference is used to determine optimal depth
of focus for the 'software lens' (Section 18.11) to correct for the effects of
volume conduction on the bulbar EEG. The theory implies that optimal focal
depth is at the mean dipole depth of the granule cell dipole generator (Fig.
21, lower frame). Penetrating microelectrodes show that the site of reversal of
ERP and EEG potential for active foci restricted to the near-planar lateral
wall of the bulb lies on the average 0.1 mm. superficial to the mitral cell
layer (Freeman 1975, pp. 219-228). The mean depth of the layer on postmortem
histological examination in these rabbits is 0.71 ± 0.18 mm; the optimal
depth of focus is 0.49 or 0.54 mm for the rabbits giving this data set, which
is about 0.1 mm less deep than predicted but within the large standard error.
(From Freeman and Baird 1986.) Lower right: the % difference is used to
evaluate the optimal number of factors to be used in the Euclidean distance
algorithm after factor analysis of the data. Two examples are shown from the 4
rabbits, one with maximal separation using 4 factors, the other with 9 factors.
When all factors with non-zero eigenvalues are used, the subgroups all approach
100% correct classification, and the % difference measure goes to zero. (From
Freeman and Grajski 1986.)
This point is
confirmed by inspection of the correlation matrix of the dominant component
amplitudes for each subject. The mean pair-wise correlation coefficient (by
z-transform) for control bursts with frequencies f1 > 55 Hz exceeds 0.9 within
subjects; that for odor bursts exceeds 0.8; but that for bursts with
frequencies f1 < 55 Hz lies between 0.1 and 0.2.
This is remarkable, in that spatial ensemble averages over bursts with f1 > 55 Hz and over bursts with f1, < 55 Hz both conform to the
same spatial pattern characteristic for each subject. In other words, the
spatial patterns of the one group are predictable from odor condition, whereas
the spatial patterns of the other group are not, although both groups must lie
within certain bounds, in order that their ensemble averages conform to the
same norm.
This finding is
important for the classification of bursts by the criteria discussed in Section
18.9; we take this up in Section 18.13 and Appendix D. Here we conclude that,
as in Section 18.4 we distinguish between 'correlated' and 'uncorrelated'
variance in order to remove the latter from sets of ERPs, we must likewise
detect and remove the massive variance contributed by an as yet unexplained
type of EEG event, before proceeding to cluster analysis and factor analysis of
well-behaved EEG events. This point is obvious in respect to known sources of
artifact such as the EOG in scalp-recorded ERPs. Here we deal with more subtle
aberrancies, the possible nature of which we discuss in Section 18.14.
This completes one
pass through the measurement of the spatiotemporal properties of the bulbar
EEG. The next step is to repeat while optimizing each step by reference to the
touchstone. Two examples are shown in Fig. 29 (lower left) for optimization of
the depth of focus of the 'software lens' (Section 18.11), and for optimization
of spatial filters (lower right) such as that illustrated in Fig. 24. These optimized
data provide a basis for evaluating a confidence interval for values of the
touchstone. This. is done by 'jack-knifing' (Ch. 17): the procedure is repeated
N times for each subject with N bursts, while deleting a different burst on
each computation. The values for each subject are normally distributed. The
square root of the mean within-subject variance is 4.09, so that the 99%
confidence interval for the touchstone is ± 10%. By this criterion the
touchstone is above zero for each of the subjects. However, the touchstone is
not a conclusive statistical test; it is a rapid and inexpensive assay of the
procedures used to optimally restructure data in order to test hypotheses. The
first priority in correlation of the EEG with behavior is not to explain the
brain; rather it is to validate the measurements before introducing the data
into statistical and explanatory models.
18.13. Spatial basis functions
from factor analysis
These results of
cluster analysis suggest that, during presentation of an odor as a CS to a
trained animal, the spatial pattern of the dominant oscillatory component of
the EEG tends to converge to a stereotypic form, such that the underlying
neural activity mediates the response to the presence of that odor (Freeman and
Skarda 1985). Our behavioral touchstone indicates that convergence either is
abrupt but often delayed, or is gradual. Over the 3 successive bursts recorded
about 0.5 sec apart on each trial after odor arrival the touchstone value rises
from 8.9% on the first sample (65.2% odor -56.3% control correct
classification) to 16.1% (74.1% - 58.0%) on the second sample and to 26.6%
(82.4% - 55.8%) on the third sample. The different spatial patterns are
established over most or all of the array window. This is shown by the fact that
when the touchstone is repeatedly recalculated after deleting groups of 8
channels, beginning with those 8 having the lowest amplitude or vice versa, the
goodness of separation deteriorates progressively. This conclusion is supported
also by detection of widespread phase gradients such as that exemplified in
Fig. 17. Our requirement stated in Section 18.12 for an invariant pattern over
repeated presentations of the same odor, but a different pattern for different
odors, may be met by the spatial pattern of the amplitude of the oscillatory
burst over the entire array, and, by inference from intrabulbar recording
(Bressler 1984) over the entire bulb. Accordingly the proper basis function for
spatial analysis must be a pattern that extends over the entire array, just as
the proper basis function for temporal analysis extends over the entire
duration of an ERP (Section 18.4).
The spatial basis
functions are empirical; they may be derived from the data by selective
averaging, or principal components analysis (PCA - Ch. 5) over a set of
dominant components from each subject and stage of training. Several
considerations enter into the selection of a procedure, mainly involving the
required conditions of linearity, normality and equality of variances. First,
the physiological model to be tested is that the spatial EEG pattern tends to
converge to one form during the control state and to different forms during
each odor state. However, at best it appears that less than 80% of recorded
bursts approach convergence in the odor states, since the degree of convergence
captured in the time window of sampling may vary, and errors of measurement and
classification obscure underlying regularities. Apart from removal of bursts
labeled as 'incoherent,' there is no a priori test as yet to determine which
recorded bursts optimally represent convergence. Therefore, selective averaging
is not feasible.
Second, a number of
findings all indicate that the spatial patterns are not restricted to
high-amplitude foci or to the area of the array window; probably they cover the
entire bulb. These findings include: the relatively equal contributions of all
channels to burst separation by the touchstone, the common instantaneous
frequency, and the common phase gradient approximating a planar or conic
surface over the array. There is evidence from anatomical analysis that the EEG
foci occur over bulbar sites that have higher densities of mitral cells and
glomeruli, perhaps corresponding to 'olfactory foveas' (Meisami and Emamian
1985). This means that the high EEG amplitudes in the focus characteristic of
most rabbits have no significance with respect to odor discrimination apart
from the degree of acuity; they are accidents from the anatomy. Then the
procedure we adopt of normalization by channel across sets of bursts, which we
justify on the basis of optimal burst separation according to the touchstone,
can also be justified in physiological terms, that each local part of the bulb
contributes to discrimination irrespective of the mean local EEG amplitude, the
latter being due to anatomical' factors unrelated to specific odors (Freeman
and Van Dijk 1987).
Third, in all odor
subsets the variations in burst amplitude from the means greatly exceed the
differences between subset means. The amplitudes of control bursts generally
exceed those of odor bursts (Fig. 27). Although this aspect of bursts does not
enter into CS+ from CS- odor discrimination, the groups should be normalized to
equal variance prior to PCA. The magnitudes of the variances are approximately
equal across sets of odor bursts after removal of the 'incoherent' bursts.
Finally, the distributions of channel amplitudes typically are skewed owing to
the relatively small numbers of very high values contributed by channels at or
near the peaks of foci, but the distributions are normal after the
normalization by channel across entire sets. For these several reasons we use
PCA of the correlation matrix rather than of the variance-covariance matrix
(Johnson and Wichern 1982).
The statistical model is

where u1,i,j is the amplitude of the normalized
and filtered dominant component (Eq. 17 in Section 18. 10 and Eq. 18 in Section
18. 11) on the i-th channel (i = 1, 64) of the j-th burst (j = 1, J bursts
entered into the analysis); Xi,k is
the i-th loading of the k-th factor derived from the eigenvector matrix for kee = 1, K factors; aj,k is the k-th factor score for the
j-th bursts; and ei,j
is an error term
assuming independent 'noise' over channels and bursts. In matrix notation
![]()
where U, is dimensioned (64 X J), A
is (J x K), X is (64 X K), and by assumption the residual E is (64 x J). The
latter assumption must be tested by examining the residuals.
PCA consists simply in
rotation and translation of the data set to new coordinate axes; these are
defined by the largest few components of the variance that are built into the
data set by odor testing. The main difficulty is that these axes are very
sensitive to distortion by outliers resulting from mistakes in editing and
preliminary classification, by errors of measurement, or by use of overly small
samples. Different subsets of data might give different factor loadings X as
estimates of what we think of as stereotypic underlying neural activity
patterns; what we seek is factorial invariance. The approach we use is to
structure the analysis so as to optimize the number of factors K. Fig. 29
(upper right) shows use of the behavioral touchstone for this purpose on the
factor scores instead of the channel amplitudes. Two examples are shown of the
effect on the % difference of increasing K from 2 to 12. Two rabbits have
maxima at K = 4 and the other two at -K = 8 and K = 9. There is no significant
change in the % difference with the use of factor scores at these maxima from
the use of channel amplitudes. The touchstone serves also to evaluate use of
Varimax rotation. Factors are selected according to the Kaiser-Gutman rule (those with eigenvalues these
incorporate on the average 92% of the variance in 4-10 factors. After rotation
the touchstone is again used to test the factor scores. The maximum %
difference is at K = 5 for two rabbits, at K = 4 for another, and at K = 3 for
the last, with mean % difference is equal to 24.8% (78.4% - 53.6%). Oblique
rotation deteriorates separation by the touchstone, suggesting that the factors
are orthogonal. Expanding the data set to include bursts from all trials
instead of only those trials on which a correct response occurred results in K
= 4 for all 4 rabbits, but the touchstone is reduced from 24.8% to 17.9% (70.5%
- 52.6%). In any case the number of variables used in the separation of bursts
is less than the number of bursts in every subgroup to be separated (Freeman
and Viana Di Prisco 1986), so that indeterminacy is avoided in equations used
to test statistical models.
An important check on
the procedure is to reconstruct the patterns in accordance with Eq. 21, and by
correlation and comparison of sums of squares, to verify that the reconstituted
patterns conform to the data patterns less the residuals. The factor scores
must be computed by the regression method (Johnson and Wichern 1982); use of
factor scores by the ordinary (unweighted) least squares method is not
satisfactory. The sums of squares of the differences between the data
(normalized channel amplitudes) and the reconstructed channel values from the
sum of the product factor scores and factor loadings in Eq. 21 are divided by
the sums of squares of the data. In the example under discussion the average
value for the correctly classified bursts for the 4 subjects responding
behaviorally was 0.039, and for the incorrectly classified bursts 0.136. For
the subject without -behavioral evidence for discrimination the ratio was
13.77, showing that the results of factor analysis were meaningless.
The next step consists
in testing for factorial invariance. We note in Section 18.6 that success in
fitting a sum of basis functions to an AERP does not suffice to define an
appropriate set; the same basis functions must hold over sets of ERPs from
differing behavioral states, and the coefficients must be well behaved.
Analogously, the factor patterns (spatial basis functions) must be shown to
hold over independent subsets each with its own covariance matrix. The data set
is divided into a 'learning' subset used to define the factors and a
'validation' subset used to test their efficacy in classification. The
multiple. factor patterns are compared by correlation (Table 1). Optimally we
must show that one set of spatial basis functions derived from a 'learning' subset
from an animal within a behavioral state, such as responding to a certain set
of odors, holds for all subsets over the duration of that state and does not
hold for subsets taken before or after that state.
PCA, like spectral
analysis, merely puts the data into a new and reduced coordinate space;
numerous procedural safeguards are needed. These statistical procedures,
together with various forms of discriminant analysis of factor scores derived
by any of half a dozen methods, go beyond the scope of this chapter and are
discussed in Ch. 5, 16 and 17. Factor components, like spectral components, are
not ends in themselves; they are the raw materials of model-building. This
aspect is taken up in the next section.
TABLE I: RESULTS OF USING CORRELATION OVER FACTOR LOADINGS DERIVED FROM ANALYSIS OF SUBSETS OF THE DATA TO TEST FOR FACTORIAL INVARIANCE

In A the data are divided into 2
subsets by partitioning the entire data set into 2 parts, one of odd numbered
bursts and one of even-numbered bursts. In B the factor analysis is done on the
data from each of the consecutive 3 behavioral sessions yielding the bursts.
The asterisks denote the correlation coefficients of the first 4 factors
reversed in sign when necessary, and (re-ranked in the few instances where the
order by rank of the eigenvalues differed over sessions) averaged (by Fisher's
z-transform) over subjects and also (in B) inter-session comparisons. These
high coefficients reflect the stability of the factor patterns over sessions.
As might be expected, each set of factor loadings from a 'learning' subset
serves approximately as well to classify bursts from a 'validation' subset.
(From Freeman 1985c and Grajski 1986.)
18.14. Limit cycle and chaotic
attractors manifested in the EEG
These optimized temporal
and spatial measurements give us the essential findings that we need in order
to choose criteria for characterizing the non-linear modes of the EEG. The
background activity, best seen in resting but awake, unmotivated animals
without bursts, consists of long stretches of irregular fluctuations that are
unpredictable over segments longer than a few hundred milliseconds and
unreproducible from one segment to the next. So also are their spatial and
spectral patterns. Ensemble averages of successive EEG time segments tend to
approach a straight line because of EEG phase fluctuations, which is the basis
for extracting ERPs that are phase locked to an event. Yet the activity is
clearly bounded in its distributions of amplitude and frequency, because ensemble
averages of spatial and spectral patterns converge to norms characteristic for
each subject. Most importantly, no matter how erratic the wave-form of any time
segment may appear, the same time series occurs concomitantly over the entire
array, although with unpredictable local differences in EEG amplitude. This
means that either each sequence emerges from within the bulb by cooperative
interaction, or that the sequence is imposed from outside. The olfactory
receptors have no known mechanism by which to generate such patterns, nor is
there any known source of centrifugal input with the required high-pass
transmission line characteristic. In any case when centrifugal input is
surgically blocked, the EEG continues with little change in its time-space
characteristics, mainly in the loss of flexibility in relation to behavior
(Freeman 1975, pp. 407-414).
The bulbar EEG appears
to be random (or chaotic) by several criteria: (a) the EEG amplitude histogram
from segments one or more minutes in length closely approximates the gaussian
density function, though with truncated tails; (b) the form of EEG fluctuations
resembles 'shot noise' generated by passing white noise through a bandpass
filter; and (c) the envelope of the EEG conforms to the Rayleigh distribution (Freeman
1975, p. 148). However, the only known source of apparently random action
within the bulb is in pulse trains of individual neurons; interval histograms
and autocorrelation functions show the form of a Poisson process with a dead
time (Freeman 1975, pp. 150-154). That is, following each pulse there is a
refractory period with zero pulse probability, but thereafter the time of
occurrence of the next pulse cannot be predicted from preceding pulses. The
cross-correlations of pulse trains from pairs of neurons show no evidence for
covariation apart from their participation in cooperative mass action. No
mechanism has been quantitatively proven whereby statistical regularities might
cause an equivalent to brownian motion to appear locally in the field potentials
of clusters of granule cells. Even if there were such a mechanism, it could not
account for the widespread spatial coherence of the temporally unpredictable
basal activity. We infer that the basal EEG activity may manifest the existence
for the bulbar mechanism of a chaotic attractor, for which the output is a
pseudo-random process, and that the non-zero equilibrium basin of the KII set
is inaccessible to the in vivo KII mass. Our criteria for this conjecture are
the boundedness in temporal, spatial, and spectral distributions, the
unpredictability of temporal wave-form and spatial amplitude pattern within
those bounds, and most importantly the widespread spatial coherence manifested
in the common instantaneous frequency over the surface. Appendix D gives an
example of the quantitative treatment of this distinction between noise and
chaos.
The EEG burst with
inhalation clearly manifests augmented metabolic energy release with the
emergence of order from chaos. It discloses a bifurcation to a different basin
of a different attractor, the result of the input and the attendant non-linear
parametric changes in the bulb (Freeman 1979b). The EEG tends toward sinusoidal
oscillation, the spectrum becomes more sharply peaked, and at high temporal
frequencies the spatial pattern of amplitude tends to converge to a
reproducible pattern. By these criteria we propose that this burst activity
represents convergence toward a limit cycle (Appendix D), and that the
convergence aborts after the termination of the input. We speculate that a
limit cycle attractor is formed during learning to respond to each
distinguishable odor given as a CS (including the background odor complexes).
These criteria appear to hold only when the frequency of burst oscillation is
above a certain level or range at or near 55 Hz (Fig. 30). Clearly for bursts
with lower frequencies there is spatial incoherence and temporal incoherence as
well, manifested in the high values for the FM parameter in the curves fitted
to their dominant components and in greater spread of burst energy across
components (Fig. 28). We believe that these events manifest the existence in
the bulb of one or more chaotic attractors other than that manifested in the
interburst periods and at rest (Freeman 1986, 1987).

Fig. 30. The map shown is derived by
use of the non-linear mapping algorithm of Sammon (1969) applied to bursts
having frequencies f, greater than 55 Hz (compare with Fig. 26). The means and
standard errors are shown for 4 sets of bursts with the indicated numbers of
bursts in each set: 2 sets of odor bursts (CS+ and CS-) and 2 sets of bursts
taken in the control periods immediately preceding odor presentation (C+ and
C-). Because the odors are presented on randomly interspersed trials in the
same session, the control bursts are considered to come from the same state and
should not differ significantly. (From Freeman and Viana Di Prisco 1986.)
Now we consider how
chaotic activity can arise from within a KII mass such as the bulb. Inspection
of each frame in Fig. 10 will show a diagonal line to the left of the vertical
axis starting near w = 400 radians/sec. This is the approximate location of the
boundary of the stable domain below and an unstable domain above. The
instability arises in the KII linearized equations, because, with certain
combinations of the feedback gain coefficients that place a complex pole above
the diagonal line, another pole moves on the real axis to the right of the
origin. In the amplitude range of the normal EEG we infer that this pole is due
to mutual excitation in the component KI, set. The non-linear model is stable,
because with increasing output amplitude (and therefore feedback gain), the
pole moves to the left toward and beyond the origin. This analysis indicates
that the source of bulbar chaotic activity lies in the tendency for the KIm mass (the mitral cells) to generate
runaway excitatory activity that is curbed (with an intrinsic delay) by the
recurrent activity of the KIG mass
(the granule cells). This curbing effect occurs only after, and to the extent
that, excitation has- already grown. On each recurrent pass through the
negative feedback loop, the gain and therefore the frequency is different. That
is, in 2 degrees of freedom afforded by feedback interaction in the KII mass, activity
is divergent in respect to mutual excitation, but convergent in respect to
negative feedback. Then an external 'random generator' need not to be
postulated to account for the bulbar background activity; it manifests a
chaotic attractor of the KIIMG mass.
Its behavioral significance is discussed in Section 18.14.
We conclude that a
stable equilibrium point is not accessible in the state space of the bulbar
mechanism, other than that which becomes apparent under deep anesthesia. That
is, the background EEG does not reveal an equilibrium state under external
random perturbation. Most important at this stage is that the concept of chaos
gives us a basis for partitioning the variance among sets of bursts into
'correlated' (pattern differences between odors) and 'uncorrelated' (chaotic
bursts) fractions. In physiological terms it is reasonable for us to postulate
that over repeated inhalations the bulbar mechanism may often fail to converge
to a coherent spatiotemporal activity pattern. Thus, it makes sense for us to
look for criteria by which will allow us to label such failures as members of
an aberrant class or set of classes. This step will be crucial in all future
analyses of EEG spatiotemporal patterns.
18.15. Conclusion. The KII set
and perception
The key to
understanding is measurement, and the key to measurement is understanding. We
raise ourselves from level to level of explanation only by building on the
foundation of prior constructions. We began this discussion with waves, and
will end it here with attractors, but we have explained only a small sample of
the EEG. We have before us a vast area to explore. It is a terrain of
specialized and adaptive generators, some of which contribute directly to the
EEG by accidents of the geometries of their electric fields, others
clandestinely by their interactions with those we can observe. They are all
interconnected within and across different levels of a hierarchy. Some groups
of neurons exchange inputs and outputs, and some serve by their outputs to vary
the parameters of others so as to induce bifurcations. Overall, the nervous
system displays deterministic evolution that is guided by its own internal
development structure and is modulated by the environment. We now have the
conceptual tools that in principle are adequate for understanding the basics of
this complex deterministic machine, but to use these tools effectively we must
first employ the classical tools of linear systems and multivariate statistical
analysis. These standard tools of physics and engineering provide our bedrock
of comprehension and orientation. To neglect them is to trust in luck and dead
reckoning, and to risk wandering aimlessly in the endless deserts of the EEG
while hoping always for a waterhole.
This essay is
concerned mainly with procedures used at the interface between raw data and
hypotheses, and therefore with measurement procedures and the validation of
those procedures by use of behavioral touchstones. The examples have been
selected and simplified in order to illustrate the main outline of the
procedures: pre-structuring of the experimental conditions; organization of the
data base, selection of basis functions, measurement by curve-fitting,
synthesis of a flow diagram; formulation of the dynamic equations, and
interpretation of the coefficients. 'Emphasis has been given to the use of
electric stimulation in lumped, linear domains, and to ordinary linear
differential equations, because this is an optimal place of embarkation for
further studies. Sensory stimulation is feasible but requires an understanding
of the transformations occurring between the stimulus and the activity arriving
at the locus of interest. Analysis of temporal dispersion, propagation delay,
diffusion, spatial divergence, and distributed feed back require partial and
integrodifferential equations that fall within the same procedures but are
unsuitable for an introduction (Freeman 1975, Ch. 2 and 4). Various types of
non-linearity require their own special techniques for analysis, but many of
them can be linearized.
Modeling the EEG involves greater
complexity. The 'inputs' may appear as random variables, and changes in wave
shapes may derive from state changes described as bifurcations in large-scale
dynamic systems. Yet the principles are the same. Any analytic basis function
for which the derivative is calculable can be used for measurement. If it is
inferred from the' data, it can lead to a generic differential equation; if it
results from a model, it may lead to new precision of measurement and insight
of interpretation. In either case it can lead to better understanding of brain
function and behavior.
We have not yet
completed the systematic analysis of chaos and of the bifurcation between chaos
and limit cycle in the KIII set. When we first encountered chaos while
developing the KII model, we were dismayed because unprepared to cope with it,
and we firmly shut the door on it by imposing the necessary constraints on the
design. Now mathematicians have provided biologists and
electroencephalographers with the conceptual tools needed to cope with chaos
(Helleman 1980; Abraham and Shaw 1983; Garfinkel 1983), and we should exploit
them. In retrospect it is all too obvious that the EEG manifests the activities
of chaotic and limit cycle generators. We should attempt to interest
mathematicians and physicists in our work. They will need our help in the
design of realistic and testable models; we will need their help to set up the
state spaces of the parameters in Lagrangian coordinates, to establish the
requisite hyperbolic metrics, to measure the fractal dimension of chaos
(Appendix D) and to define the. trajectories on which bifurcations occur. The
KII set provides an excellent starting point for understanding the cellular biophysics
of the EEG. It is, after all, an ultimately simple, deterministic, generalized
descriptor of the dynamics of a mass of non-linear excitatory and inhibitory
neurons. We predict that it will become a prototypic and essential module for
all parts of the cerebral cortex (Rössler 1983).
The KII set has
equivalent value as a starting point for psychological analysis of the brain
states and operations that underlie goal-directed behavior. These include
expectancy, attention, and the capabilities of animals to establish and use
'search images' (Freeman 1983; Freeman and Skarda 1985) that constitute the
selective neural control of input based on past experience. Over the past 3
decades consensus has grown that the element of cognitive function is not the single
neuron but the nerve cell assembly (Hebb 1949). Von Neumann adopted this view
in his last work (1958). Turing (1952), having dropped his interest in logical
machines, similarly turned his remarkable intelligence to the study of the
morphogenetic properties of large systems of interactive particles, thereby
establishing a new field of mathematical analysis of living systems. Numerous
works on the theory of self-organizing ensembles have since appeared in the
past 5 years.
If the nerve cell
assembly is the basis for cognitive function, then it is essential that we have
first the tools to make direct observations on the spatial activity patterns of
assemblies with arrays of electrodes for simultaneous recording from waking
animals engaged in cognitive behavior, and second that we have models that
explain how the observed patterns are generated and how they help to determine
behavior.
Our present interpretation is that the
KII nerve cell assembly in the bulb can sustain an indefinite number of stable
attractors. We suggest that in the background state it has a chaotic attractor,
which holds it in a state of sensitivity and unbiased readiness to respond
quickly to any odor that might arrive. With inhalation the rise in level of
receptor input increases the non-linear feedback gain within the assembly, so
that it is driven away from this basal attractor. The odor input also
determines the initial conditions for a state change represented by a
bifurcation to a different attractor. For each odor that the rabbit has learned
to identify there may be a limit cycle attractor based on synaptic changes
during the learning process. The formation of an attractor, we propose, is
revealed by changes in EEG spatial pattern with olfactory conditioning (Freeman
and Schneider 1982; Viana Di Prisco and Freeman 1985; Gray et al. 1986). The
domain of input during the learning period establishes the basin for that
attractor. If on subsequent inhalations the inspired air contains that odor,
the assembly is placed in the basin for that attractor, and the stereotypic
spatial pattern that emerges may suffice to encode that odor, irrespective of
which among the set of equivalent receptors received the odor on a given trial.
This operation constitutes figure completion and generalization over equivalent
stimuli. In this view sensory selection consists of a learned limit cycle
attractor and its basin for receptor input (Freeman and Skarda 1985).
In the control state
when the animal is breathing air without conditioned stimulus odors, a reproducible
spatial pattern results that may suffice to encode the background odor complex.
This stereotypic control burst may represent confirmation by the olfactory
apparatus of the persistence of an unchanging background. When novel or
unexpected odors are given, there is evidence that the assembly is driven from
low-level chaos to a high-level attractor that lacks a stable spatial form.
Such 'chaotic bursts' may signal that the bulbar assembly has failed to
converge to a learned attractor of a known odor, but that an unidentified odor
may be present that will require orienting or re-testing. In other words, the
bulb may have the capability for reporting: 'test is inconclusive, re-testing
is imperative.' According to this interpretation inconclusive outcomes also
occur sporadically during control periods, and more frequently during testing
with conditioned odors.
Success in the
description of these self-organizing properties of nerve cell assemblies in
hierarchies will have major impact on several fields of study. Most obviously,
the neurological basis for the study of perceptual and movement disorders will
be improved. Understanding of mechanisms controlling fetal development of the
brain will be enhanced; it is obvious from fetal movements in utero that the
brain is highly active during its formation, and that the activity patterns
arising from within must contribute to formation of patterns of organization of
connections. The structure of the adult brain may in large measure reflect the
stored patterns of past activity, just as we believe that the patterns of
neural activity during learning leave their traces in synaptic changes that
guide future activity. Studies by psychologists of mental images, attention,
and voluntary motor activity will be greatly assisted by detailed understanding
of the physiological bases for these properties underlying human and animal
behavior (Freeman 1983). And just as the design and early development of
digital computers and automata took place in the context of theories of the
nervous system in the 1940s, the next major developments in machine intelligence may occur in the
context of the mathematics of self-organizing nerve cell assemblies.
Appendix A. Linear differential
equations for ERPs and PSTHs.
The procedure for
constructing equations from data lies at the cutting edge of analysis. We
illustrate it first for the passive membrane in order to draw the principles
from the most widely known instance.
Suppose that a pair of
electrodes is placed on each side of the membrane, one for passing a
transmembrane current impulse (the input, I(t) at t = 0), and the other pair
nearby on each side of the membrane, for measuring the transmembrane potential
difference (the output, v(t) or simply v). Within the linear range v jumps to a
new value v0 with the pulse and then decays
monotonically back to the baseline that existed before the pulse, say v = 0.
The response wave-form seems to conform to an exponential curve:
![]()
This equation is the solution to a
first order linear differential equation, using t HETA to denote dv/dt:
![]()
where kee and a are constants to be
determined. From knowledge of physical systems in general, and of the chemical
and anatomical structure of membrane in particular, a model is devised in which
the membrane is represented by a resistance, R, in parallel with a capacitance,
C. A time constant is defined, a = 1/RC, and v0 = kI = I/C. Then the theoretical curve for a pulse input,
![]()
is fitted to the experimental data
by linear regression in semi-logarithmic coordinates in order to measure R and
C. Finally, we interpret R and C to mean the existence in the membrane,
respectively, of pores through which ions may pass and of stored charge on or
in the lipid layer acting as a dielectric.
In review, the 3 steps
are: (1) making an observation of an event (the wave shape); (2) constructing,
evaluating, and solving a differential equation; and (3) interpreting the
parameters of the equation in terms of subsystems. The 3 steps are used in each
of the following 3 illustrations.
The effect of axonal,
synaptic and cable delays is illustrated for a KOi set. Suppose that a stimulating electrode is placed on the
lateral olfactory tract (LOT) to stimulate antidromically the axons of the
mitral cells so as directly to excite the bulbar Kli mass comprised by granule cells. In
the appropriate experimental conditions (see Ch. 4 in Freeman 1975) the
response of the kij
set is recorded
from a monopolar electrode on the bulbar surface with respect to a distant
reference electrode. In waking or lightly anesthetized animals the impulse
input initiates prolonged interactions, but under very deep anesthesia the
interactions are suppressed, and the KIi mass is reduced to the KOi state.
With the impulse
input, I(t), a rapid increase is observed in surface-negative potential
followed by a less rapid decay (Fig. 31, upper curve). For simplicity, the
factors are omitted for afferent temporal dispersion in the input tract and the
late positivity or dendritic after-potential. By appropriate stimulation with
pairs of stimuli to test for proportionality and additivity, a linear range for
observation is established. The response can be fitted with an equation in the
form
![]()

Fig. 31. The data show predicted
(curves) and observed (symbols) bulbar responses (averaged evoked potentials or
ERPs) under deep pentobarbital anesthesia (the open-loop state) on single-shock
LOT (a) or single-shock PON (b) electrical stimulation. (From Freeman 1975, pp.
309-314.)
The first term
represents a down exponential curve, v = v0 at t = 0, and conforms to the decay of the response. The
decay rate is a. The second term represents an upward exponential curve, v = -v0 at t = 0, and the coefficient b
determines the rate of rise. When the second curve is subtracted from the
first, the amplitude at t = 0 is zero, and the peak latency is seen to depend
on both a and b. This is the characteristic form, of an EPSP as well as the
simplest form of cortical evoked potentials. The curve must be fitted to the
data using non-linear regression, because the form corresponds to the sum of
two exponentials.
Eq. 4 is the solution to a linear
second-order differential equation,
![]()
where kee is a gain coefficient. A KO model is
devised to represent the KOi mass
as a large number of neurons in parallel, each of which performs 3 operations
on its input: input connection strength represented by kj; combined axonal, synaptic and
cable delay represented by bj;
and passive membrane decay represented by a. The KO set represents an average
neuron in which the passive membrane model is one of its parts: a = 220/sec. -
1/4.5 msec (the passive membrane decay), and b = 720/sec = 1/1.4 msec (lumped
axonal, synaptic and dendritic cable delay) represent the average rate
constants. When the stimulus intensity is changed over a wide range, the
response amplitude changes proportionately, but the rate coefficients do not
change. This is evidence for function in a linear dynamic range. When
extrapolated to the waking state it is a basis for fixing the rate constants in
higher order equations and allowing only the gain coefficients to change. The
interpretation is that the time constants of neurons are determined by the biophysical
properties of cell membranes and by dendritic architecture, that these do not
change rapidly with behavior, and that functional changes in relation to
behavior are based on changes in strengths of interaction within neural masses
represented by the k's.
The procedure is
repeated under deep anesthesia (what is called the 'open-loop state,' because
interactions are suppressed), but this time with stimulation of the KOi set orthodromically by way of the
primary olfactory nerve (PON) and the mitral cells (the bulbar KIe mass). The output is still that of
the granule cells, but the rise time of the response to the impulse is slower
(Fig. 31, lower curve). This reflects the delay contributed by the synaptic,
cable, and passive membrane properties of the KOe mass in series with the KOI mass. We construct a system of 2 second order linear
differential equations:

Eq. A6a says that the input kPI(t) to the KO, set is an impulse,
and the output of the KOe
set Ve has the form specified by Eq. A4.
Eq. A6b says that the input keve to the KOi set is the output of the KO i set v, times its gain coefficient ke, and the output of the KOi set vi can be predicted by solving Eqs. A6a and A6b for v i.
The solution gives a
curve, which is fitted by non-linear regression to the observed wave-form to
evaluate a and b. Experimentally a, = ai and b, = bi, so
that the equation for the fitted curve (Fig. 31, lower curve) is:
![]()
Further details are given elsewhere
(Freeman 1975).
When the values are
determined for the open loop rate constants a and b, the form of the response
of the KII set can be predicted for the waking 'closed-loop state' when
interactions are present. For simplicity, the model is restricted to the
'reduced' KII set, in which the interactions within the Kle and KI, sets cancel each other. The
proof that this occurs and the relevant experimental conditions are described
elsewhere (Freeman 1975). The outputs are taken from the KIi set to simulate the bulbar ERP, and
from the Kle set to simulate a bulbar poststimulus
time histogram (PSTH). For PON stimulation, the differential equations are

Eq. A8a says that the input to the
KI, set is the sum of an impulse kpi(t), minus the output of the Kli set vi
times its gain
coefficient kee,. The KIi input is inhibitory, so the sign of
ki is negative. Eq. AM says that the
input to the KIi set is given by the output of the Kle Set times its gain coefficient ke. The sign is positive because the
Kle output is excitatory. For LOT
stimulation the input term k1I(t)
is added to Eq. A8b and the input term is deleted in Eq. A8a.
This pair of equations
describes a negative feedback loop (Fig. 9). The solutions consist of damped
(exponentially decaying) sine and cosine waves with frequency w in radians per
second, phase f in radians, and decay rate cc in seconds:

Eq. A9a predicts the closed-loop
output of the Kle set (the PSTH), and Eq. A9b, that of
the KIi set (the ERP). These predict that
the activities of the KIe
and kij masses should oscillate at the same
frequencies and decay at the same rates but with 90° of phase lead for the
output of the KIe set over that of the kij set. This should hold both for PON
and for LOT input. The values for w and a should depend on the site and intensity
of input (Fig. 32).

Fig. 32. The data show predicted
(curves) and observed (symbols) bulbar responses (ERPs) from granule cells (KIG mass) to single-shock electrical stimulation of LOT (left)
or PON (right) under light anesthesia. A: poststimulus time histograms (PSTHs)
from mitral cells (KIm mass) derived concomitantly are
fitted with curves simulated with the K11MG
set. (From
Freeman 1975, pp. 314-321.)
The basis for the
oscillation and for the KIe
phase lead is intuitively explained as follows. Excitation of the KIe mass excites the KIi mass, which then inhibits the KIe mass. Inhibition of the KIe mass disexcites (inhibits) the ki mass, which disinhibits (excites)
the KI, mass. The cycle repeats with a time period that depends on the rate
constants, a and b, and on the product of keki, which is called the negative
feedback gain, Kn. If we know a, b, w1, and a1, then we can evaluate Kn, which is the numerical estimate or
measurement of the strength of interaction between the KIe and KIi masses (see Fig. 10).
For contrast, the form
of the response is predicted for the KIP set (Fig. 9) upon impulse stimulation
of the PON. The neurons are mutually excitatory (Freeman 1975; Martinez and
Freeman 1984), so this is a case of positive feedback. The differential
equations are

Eq. A10a says that the input kPI(t) to the KIP set is received by a subset with
active state pr that is not transmitting at the time
of I(t) at t = 0, and that this subset also receives from the transmitting
subset with active state pt times kt . Its output is pr times its gain kr, Eq. A10b says that the input to the transmitting subset pt is the output pr of the receiving subset times its
gain coefficient kr
The solutions for the outputs of the
two subsets are
![]()
![]()
where prj, ptj, and aj(j =
1, ..., 4) are real or complex. The 4 rate coefficients result from the
combination of 2 second order differential equations, and they are identical in
Eqs. A11a and A11b. The total output of the KIP set is p = pt + pr.
The predicted output
(Fig. 33) consists of a sharp increase in pulse density followed by a slow decay to the prestimulus baseline
without overshoot. The rate of increase depends on whether or not the subset
under observation receives the PON input volley. The decay rate to the
baseline, al, depends on a, b, and the product of krkt , which is the positive excitatory feedback gain, KP. From the values of aj, prj, and ptj,
j= 1, 4, the strength of interaction, KP.) can be evaluated in the KIP mass (Appendix B).

Fig. 33. The plotting symbols show
the digital values of the PSTHs taken from a periglomerular cell in the
olfactory bulb at 6 successively increased stimulus intensities. With increased
input strength and output magnitude the response decays more rapidly to the
baseline without overshoot. The dashed curve is the best fit of an empirical
set of basis functions by the least squares criterion. The two solid curves are
the predicted outputs of the forward and feedback limbs of the KIP set as shown in schematic form in Fig. 10. It is apparent
that at low stimulus intensity this unit is not directly excited by the primary
olfactory nerve (PON) input but secondarily by its neighbors. At higher
stimulus intensity it is directly excited. For analysis see Fig. 34. (From
Freeman 1975, pp. 285-291.)
Appendix B. The root locus method
applied to ERPs and PSTHs
The results of
measurements of ERPs with linear basis functions consist of the numbers of
amplitudes, frequencies, phases and decay rates of the sum of terms in an
equation containing sines, cosines, exponentials, and so forth. We need
displays of the sets of coefficients from the ERPs comprising each AERP. The
most useful display is called the s-plane; it derives from the fact that the
equation of the curve fitted to the data is the solution of an ordinary linear
differential equation with an impulse input. This differential equation can be
written several ways: as an n-th order set of derivatives with respect to time;
as a set of n first order time derivatives; or in operational form as an
algebraic equation by use of the Laplace transform, in which the differential
operator d/dt is replaced by the Laplacian operator s. In fact the simplest and
easiest way to construct the differential equation is to look up in a table the
Laplace transform of each of the sum of terms in the equation used for
curve-fitting and assemble them in the form of a factored polynomial.
The general form, of
the differential equation in s is the ratio of two polynomials. Where v(t)
represents an EEG, ERP or PSTH amplitude as a function of time, and V(s)
represents the same as a function of s, for input I(s).
![]()
For ERPs and poststimulus time
histograms (PSTHs) I(s) = I times the stimulus intensity. The coefficient K is
a real number representing amplification or gain. The coefficients pi represent the characteristic
frequencies and decay rates of the neural system that are called the poles. The
coefficients zj represent the frequencies and decay
rates at which activity cannot occur, as already noted in spectral analysis of
ERPs (Section 18.5). The bases for these manifestations of 'forbidden zones'
are called the zeroes of the system. The poles and zeroes together comprise the
roots of the system. The zeroes are not explicit in rate coefficients from ERPs
but are implicit in the relative amplitudes and phases of the several terms in
the equation of the fitted curve. Identification and evaluation of the zeroes
may become a major part of the task of synthesizing a model.
Zeroes appear in the equations for neural systems mainly for 3 reasons. First, the poles of the transfer function of the feedback limb in a loop always re-appear as zeroes in the closed loop transfer function (Fig. 34). Second, rational approximations for distributed delay and dead time always introduce zeroes into the right half of the s-plane. Third, summation at convergence points of two or more pathways introduces zeroes. For example, the damped cosine wave components of the currents from evoked potentials of two neural populations sum in the volume conductor; they may beat together and partially cancel each other. The sum of their transfer functions, each with a complex pole pair, contains 4 complex poles and 2 complex zeroes (Freeman 1975, Ch. 2 and 5).

Fig. 34. Two plots of the s-plane are shown in order to
demonstrate the procedure for estimating closed loop gain from measurements of
the PSTHs from a Kle set stimulated electrically at 6
different intensities. The upper frame shows the poles derived by fitting sums
of two exponentials and a damped cosine to the PSTHs; the zeroes cannot usually
be evaluated explicitly. The dark curves show the estimated locations of the
closed loop root loci for the KI set. The lower frame shows the full root locus
diagram after the locations have been estimated for the open loop poles, which
become the closed loop zeroes with non-zero loop gain. Selected gain contours
are shown, including those for the minimal and maximal gains determined from
the PSTHs and for unity gain. The loop gain increases with decreasing response
amplitude and by extrapolation it reaches unity at zero amplitude. This is
evidence that the KIe, set is stabilized by its intrinsic
non-linear gain, and that an inhibitory interneuron population is not required,
although its presence is not thereby ruled out. (From Freeman 1975, pp.
291-305.)
Each of the roots is
either a real number in the case of exponential decays, or a complex number in
the case of damped sine or cosine waves. In the latter case the frequency w and
decay rate a are transformed by Euler's theorem to a pair of complex conjugate
poles or zeroes, for example, pi = a
+ jw and pi+1 = a - jw, where w = 2πf, and
a = 1/t, a time constant. The s-plane for display has the
coordinates a and jw (Figs. 8, 10 and 11). The real numbers for s = -zi and s = -pi lie on the a-axis, negative to the
left. The complex numbers lie in the plane at s = -a ± jw. Owing to
mirror image symmetry only the upper half of the s-plane need be shown. Then
the results of measurement for each ERP take the form of a constellation of
roots (open loop poles marked by X, closed loop poles by ∆, open loop
zeroes by 0, closed loop zeroes by ) in the s-plane.
We will now illustrate
the method for evaluating loop gain KP. The set of frequencies and decay rates of the dominant component are
shown as triangles; the s-plane in Fig. 34. The upper frame shows the locations
of the poles derived by fitting a curve to each of the PSTHs shown in Fig. 33.
The zeroes are not yet defined or evaluated. The curves represent the root loci
that are to be defined. A differential equation is formulated with the two
identical KO sets arranged in mutual excitation. This is solved for different
values of the open loop rate constants a and b and for a set of values of feedback
gain KP. The rate constants are determined
by trial and error in order to place the root locus through the complex poles.
The gain is evaluated by approximation to force the contour for a gain value
through the real axis at the location of a real-valued pole nearest the origin.
The same gain contour should then pass through the complex-valued poles from
the same PSTH. The gain contours for unity gain and for the minimal and maximal
gains of the PSTHs are shown as the closed curves in Fig. 34, lower frame. The
open loop poles become the closed loop zeroes of the non-zero feedback system.
These are shown as small squares on the negative real axis. Further details
with more examples are to be found elsewhere (Freeman 1975, Ch. 2, 5 and 6).
Appendix C. Non-linear
integrodifferential equations for EEGs
The circuit diagram
for the KII subset is shown in Fig. 9. As described in Section 18.8 each KI
subset is replaced by 2 KO subsets. Each component KO subset has 2 state
variables: u(t) in the dendritic current or wave mode and p(t) in the axonal
impulse density or pulse mode. The conversion from pulse to wave at synapses is
linear and is represented by a synaptic coefficient. The conversion from wave
to pulse is a non-linear operation that is represented by the sigmoid curve in
Fig. 35 (left frame).
The equations are
expressed in normalized pulse density Q and in normalized wave amplitude v with
respect to a basal level of wave bias uo representing a scalar quantity that varies with the level of arousal or
motivation.

By appropriate choice of units of
measurement, po = uo and
![]()
The normalized equations for Fig. 35
are


Fig. 35. The left frame shows the non-linear relation
between dendritic wave amplitude and impulse density at trigger zones of
neurons in a KO set from Eq. 14. The 3 triangles show the rest state at v = uo and p = po, the mean background pulse density.
The lowest curve corresponds to the state under light anesthesia, the middle to
a waking but unmotivated state, and the higher curve to a mild degree of
motivation, such as that induced by a few hours of food deprivation. The right
frame shows the corresponding gain curves from Eq. 16. Maximal gains may exceed
values of 20; the sensitivity of the KIe set may vary over a range of
1-40,000. (From Freeman 1979a.)
The lower asymptote is determined by
the distribution of thresholds in the KO subset. The exponential increase is
determined by the properties of the axonal trigger zones just below threshold
in the Hodgkin-Huxley system. The upper asymptote is determined by the
refractory periods and long-lasting recovery processes for all neurons in the
subset (Freeman 1979a). The maximum Qm is also a function of level of background bias uo, so that the form of the curve
depends on the value of a single parameter (Fig. 35). It is evaluated by
fitting the curve to experimental data (Freeman 1979a). From the fact that
pulse densities cannot be negative,
![]()
The non-linear gain (Fig. 35, right
frame) is given by
![]()
The wave amplitude vmax at which the maximal gain occurs is
displaced to the excitatory side.
![]()
It is this property that underlies
the parametric change in KII feedback gains with changes in level of input,
because excitatory activity in the KIe set is self-regenerative.
The linear operations
of axonal, synaptic and dendritic cable delays and the passive membrane decay
are approximated by a linear second order ordinary differential equation.
![]()
The 4 elements in each subset are
linked with other elements according to Fig. 9 in the following equations.

where N is determined by
measurements of spatial divergence in the nerve cell assembly (Freeman 1975,
Ch. 4), and by the boundary conditions, either circular for the 1-D case or
toroidal for the 2-D case (Freeman 1979c). The strengths of action kij are defined and described in
Section 18.7. The superscripted excitatory gains keejk are modifiable in order to
represent synaptic changes during associative learning. The others are fixed.
The input from receptors is designated
Ij for the j-th element. The
superscripted parameters ze can be modifiable in order to represent the synaptic
operation of habituation.
Examples of the
solutions to these equations for input that simulates the time course of
receptor input density to the bulb during inhalation are shown in Fig. 14.
Simulation of chaotic activity requires a structural change in the model, that
can be described generically as an increase in the positive and negative
feedback within the KIII set (Section 18.1). This aspect of the model has not
yet been adequately developed (Freeman 1986, 1987).
Appendix D. Estimation of dimensions of chaos in EEGs (with K.A. Grajski)
Techniques for
demonstrating and characterizing chaos in experimental preparations arise from
the study of theoretical dynamical systems, that is, models with solutions that
describe the time evolution of the states of the systems based upon a knowledge
of initial conditions and state transition laws. Associated with each model is
a geometrical 'phase space' representing the entirety of states which the
modeled system may occupy. (The dimension of phase space is equal to the number
of measures required to specify an arbitrary initial state for the modeled
system.) The time evolutions of the states for this system are represented by
trajectories from an initial point in phase space. Deterministic chaos or
turbulent behavior of trajectories has been described for many dynamical
systems and shown to differ fundamentally from random behavior (Gurel and
Rössler 1979; Helleman 1980). The techniques developed to characterize
chaotic behavior and differentiate it from random activity in dynamical systems
can, in principle, be applied to experimental data (Rössler 1983).
The behavior of
trajectories is described both temporally and geometrically. Their relationship
is analogous to that between temporal and spectral time series analysis; they
are fundamentally related through the Fourier transform, and each captures a
unique aspect of a time series. With each type of asymptotic temporal behavior
there is associated a corresponding subspace of phase termed the 'basin of
attraction,' that has the property that once a trajectory falls within it, it
will, barring changes in the parameters of the system, remain there.
Asymptotically, the temporal behavior of the trajectory is that of the
associated attractor.
The basis for a
temporal description of trajectories is an analysis of the stability
characteristics of local regions of phase space. A trajectory may diverge from,
remain fixed on, or contract along each of the N dimensions corresponding to
any subregion of phase space. The spectrum of N Lyapunov characteristic
exponents quantifies these tendencies. The relationships between these
exponents and various measures of the dimension of attractors has received much
study (Farmer 1982). However, the nature of these relationships is in question;
the exponents are, difficult to compute and do not yield as much information as
do geometrical approaches (Grassberger and Procaccia 1983).
Geometrical (phase
space) descriptions of random perturbations from a stable state differ
fundamentally from those for chaotic activity. For a stable state the phase
space volume contracts within the basin towards the attractor. That is, local
neighborhoods corresponding to 'close' initial conditions give the same
asymptotic behavior and are bounded within the structure of the attractor. The
simplest stable state is associated with a point attractor of dimension 0. A
limit cycle attractor is dimension 1. Chaotic -activity, on the other hand, may
stretch and fold as well as contract phase space volume. The stretching
corresponds to divergence along particular dimensions, i.e., instabilities. The
folding is owing to the fact that the activity is bounded within the attractor
by the presence of convergence along other dimensions, i.e., stability. While
chaotic activity may appear random, it is strictly determined by the interplay
of these convergence and divergence properties. The structure of chaotic
attractors is described with a variety of measures of 'dimension' (Farmer
1982). The most commonly applied is the Hausdorff-Besikovich or fractal
dimension (Mandelbrot 1982). Experimentally, a fractal dimension lower than the
dimension of phase space suggests that the dynamics of the system behavior can
be modeled within the subspace belonging to a chaotic or 'strange' attractor
(Farmer 1982).
Before we apply any
'dimension seeking' algorithm, we must specify the relationship between
experimental data and the phase space of a corresponding dynamical system. In
this appendix we use field potentials to construct phase spaces by fitting to
them the solutions of differential equations. Similarly, with the array
recording technique each channel is interpreted as sampling the activity along
one dimension of phase space. The corresponding dynamical system is the
distributed KII set (Sections 18.1 and 18.7). At each time the spatial sample
is a measurement of a point in a 64-dimensional space. The search for chaos in
such data is a search for a spatial chaotic attractor. An alternative approach
reconstructs phase space from single time series. (Packard et al. 1980;
Grassberger and Procaccia 1983). The main requirement is several thousand
samples of activity associated with the attractor. However, this approach is
less appropriate for the olfactory EEG, because its activity appears to shift
repeatedly between limit cycle and chaotic attractors. Since an unbroken
stretch of EEG reflects the contributions of several attractors, the resulting
measures of dimension may be misleading. The advantage of a multi-channel
approach is that phase space can be sampled spatially during presumed activity
owing to a particular attractor. In either case the time series is segmented
with separate evaluation of burst and interburst states. A limitation shared by
both approaches is the 'curse of dimensionality.' As the presumed dimension of
phase space increases, the number of samples required to attain a robust result
increases exponentially.
One method for
assessing the fractal dimension of an attractor is the algorithm due to
Grassberger and Procaccia (1983). This algorithm exploits the geometrical
difference between random perturbations and chaotic activity to calculate an
estimate of dimension. Due to the stretching of phase space in an attractor,
points become temporally uncorrelated. Owing to the folding, however, points
are spatially correlated. The spatial correlation is measured by:
![]()
where Y is the number of pairs (i,j)
such that |
i -
j| < r; that is,

Using each available point Xi, once as a reference, the number of
points which fall within a distance r is counted. Selecting an appropriate distance
range is a 2-step process. An initial 'broad band' analysis with large distance
increments is used to assess the average distance between points. With these
averages as the middle values, a 'fine tuned' analysis (100-1000 distance
increments) is applied. The result is averaged over all points; the procedure
is repeated incrementally over a range of distances.
Grassberger and Procaccia show that
for small r,
![]()
The exponent v is shown to be a
lower limit for the fractal dimension and is termed the correlation exponent
(CE). Random noise is shown to give CE = M in M dimensional space (M = 1, ...,
64). If the value of the exponent calculated is less than M and is fractal,
then the data stems from deterministic chaos. With increasing distance r the quantity
C(r) increases from zero to some maximal value <M. The slope of this curve
is approximated in log • log coordinates by linear regression on the
points in the range of r wherein the slope is maximal and near linear.
As an example 360
bursts (38 x 64) recorded from a rabbit over 3 sessions are divided into 3
groups by the criteria described in Section 18.12 (Fig. 29, upper left):
coherent control bursts, coherent odor bursts (both presumed limit cycle
activity), and incoherent bursts (presumed to be chaotic activity). These
criteria are the frequency of oscillation, and spatial and temporal coherence
measures discussed earlier. Assessment of the dimension of presumed limit cycle
activity serves as one control for the application of the Grassberger-Procaccia
algorithm. We predict that limit cycle activity will have an integer
correlation exponent (Farmer 1982; Grassberger and Procaccia 1983). However,
the best experimental data are subject to random disturbance which may affect
measurement with the algorithm (Ben-Mizrachl et al. 1984). The degree of
disparity of the CE from an integer value may suggest a 'confidence interval'
for subsequent measures. Another control is to generate random vectors in
64-space where the total number of points is similar to that for the 3 groups.
The degree to which the correlation exponent differs from 64 indicates the
strength of the 'curse of dimensionality.' If there is a breakdown in equality
at some value of dimension lower than 64, then that value defines the upper
limit of resolution for that sample size.
Preliminary results
with N = 6150 samples from coherent control bursts under air stimulation yields
CE = 4.096; 2770 samples from coherent bursts under odor stimulation yields CE
= 4.881; 4750 samples from incoherent bursts gives CE = 4.578. The presumed
limit cycle activity has values 'close' to the integers 4.0 and 5.0, suggesting
a 'confidence interval' of 0.12. For 4000 random vectors generated with a
Normal (0, 1) generator embedded in M dimensions, the Grassberger-Procaccia
algorithm gives CE = M (within ±0.05) up to at least 8 dimensions.
Hence, the present range of correlation exponents calculated for this EEG data
appears well within the limits of confidence in the performance of the
algorithm. By these criteria the CE for the incoherent bursts is fractal, and
we conclude that the incoherent bursts are chaotic. The validity of these
estimates of the dimensions and their physiological meaning remain to be
determined.
Acknowledgements
Supported by Grant MH06686 from the
National Institute of Mental Health, and by Grant NS16559 from the National
Institutes of Health, United States Public Health Service.
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